Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif TWI comparison [dmmpmm_compare_html]

motif alignment Bigfoot Down Papatsenko Pollard SeSiMCMC motif similarity Bigfoot Pollard Down SeSiMCMC Papatsenko Bigfoot 1.0 0.313 0.3561 0.5513 0.2882 Pollard 0.313 1.0 0.3146 0.3124 0.2186 Down 0.3561 0.3146 1.0 0.355 0.4407 SeSiMCMC 0.5513 0.3124 0.355 1.0 0.2608 Papatsenko 0.2882 0.2186 0.4407 0.2608 1.0