| UniProt |
VSX2
|
| motif weight | 23.0 |
| total sequences | 23 |
| data sources |
TRANSFAC20112:23
|
| motif logo |
|
| consensus | TAATTAGCnhd |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
0.0 1.9261 0.0 21.0739
21.3005 0.0 1.6995 0.0
23.0 0.0 0.0 0.0
0.0 0.0 0.0 23.0
0.0 0.0 1.0197 21.9803
20.9606 1.0197 1.0197 0.0
0.0 0.0 23.0 0.0
0.0 20.2808 2.7192 0.0
4.0788 4.0788 4.7586 10.0837
9.064 4.7586 2.0394 7.1379
9.4323 2.2943 4.3337 6.9397
|
| PPM | A C G T
0.0 0.0837 0.0 0.9163
0.9261 0.0 0.0739 0.0
1.0 0.0 0.0 0.0
0.0 0.0 0.0 1.0
0.0 0.0 0.0443 0.9557
0.9113 0.0443 0.0443 0.0
0.0 0.0 1.0 0.0
0.0 0.8818 0.1182 0.0
0.1773 0.1773 0.2069 0.4384
0.3941 0.2069 0.0887 0.3103
0.4101 0.0998 0.1884 0.3017
|
| PWM uniform | A C G T
-2.1205 -0.8801 -2.1205 1.2076
1.2179 -2.1205 -0.9674 -2.1205
1.292 -2.1205 -2.1205 -2.1205
-2.1205 -2.1205 -2.1205 1.292
-2.1205 -2.1205 -1.2872 1.2482
1.2024 -1.2872 -1.2872 -2.1205
-2.1205 -2.1205 1.292 -2.1205
-2.1205 1.1706 -0.6234 -2.1205
-0.2954 -0.2954 -0.1646 0.5088
0.4103 -0.1646 -0.8391 0.1926
0.447 -0.7527 -0.2443 0.1673
|
| PWM hg19 | A C G T
-2.1205 -0.7466 -2.1205 1.0589
1.0691 -2.1205 -0.8386 -2.1205
1.1428 -2.1205 -2.1205 -2.1205
-2.1205 -2.1205 -2.1205 1.1428
-2.1205 -2.1205 -1.1797 1.0993
1.0537 -1.1797 -1.1797 -2.1205
-2.1205 -2.1205 1.4695 -2.1205
-2.1205 1.3474 -0.4785 -2.1205
-0.4235 -0.1397 -0.0055 0.3661
0.2688 -0.0055 -0.7036 0.0544
0.3051 -0.6131 -0.0872 0.0294
|
