| UniProt |
VDR
|
| motif weight | 115.0 |
| total sequences | 120 |
| data sources |
JASPAR:10 TRANSFAC20112:110 |
| motif logo |
|
| consensus | RGGTYAhnRRGKKSRb |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
41.9324 2.843 66.6506 3.574
8.4477 2.9242 102.166 1.4621
0.6498 4.0614 84.6145 25.6743
5.5235 4.3863 8.8539 96.2363
3.0867 83.2336 10.8846 17.7952
100.129 3.574 6.2608 5.0361
39.3596 19.6087 18.6215 37.4101
23.264 35.4607 35.367 20.9084
30.0871 5.1377 70.0075 9.7677
59.5713 4.3051 48.2806 2.843
8.7726 3.0054 101.6786 1.5433
1.4621 0.7311 41.7512 71.0557
12.759 7.1481 15.7582 79.3347
6.3358 80.878 14.3774 13.4089
71.5243 12.6778 20.3195 10.4784
17.8733 47.9651 21.2849 27.8768
|
| PPM | A C G T
0.3646 0.0247 0.5796 0.0311
0.0735 0.0254 0.8884 0.0127
0.0057 0.0353 0.7358 0.2233
0.048 0.0381 0.077 0.8368
0.0268 0.7238 0.0946 0.1547
0.8707 0.0311 0.0544 0.0438
0.3423 0.1705 0.1619 0.3253
0.2023 0.3084 0.3075 0.1818
0.2616 0.0447 0.6088 0.0849
0.518 0.0374 0.4198 0.0247
0.0763 0.0261 0.8842 0.0134
0.0127 0.0064 0.3631 0.6179
0.1109 0.0622 0.137 0.6899
0.0551 0.7033 0.125 0.1166
0.622 0.1102 0.1767 0.0911
0.1554 0.4171 0.1851 0.2424
|
| PWM uniform | A C G T
0.3649 -2.0055 0.818 -1.8388
-1.1338 -1.9855 1.2391 -2.4251
-2.7914 -1.7413 1.053 -0.1084
-1.4955 -1.6812 -1.0925 1.18
-1.9468 1.0367 -0.9083 -0.4556
1.2192 -1.8388 -1.3913 -1.5709
0.3034 -0.3644 -0.413 0.2541
-0.2024 0.2023 0.1997 -0.3037
0.0437 -1.5547 0.8663 -1.0054
0.7078 -1.6959 0.5022 -2.0055
-1.1006 -1.966 1.2343 -2.3949
-2.4251 -2.7482 0.3607 0.881
-0.7639 -1.2787 -0.5691 0.9894
-1.3812 1.0084 -0.6541 -0.7184
0.8874 -0.7698 -0.3308 -0.9425
-0.4515 0.4958 -0.2868 -0.0296
|
| PWM hg19 | A C G T
0.2148 -1.873 0.9981 -1.9526
-1.2681 -1.852 1.4202 -2.5076
-2.8435 -1.5968 1.2337 -0.2557
-1.621 -1.5344 -0.9294 1.0274
-2.056 1.2174 -0.7418 -0.5999
1.0665 -1.6983 -1.2352 -1.6942
0.1536 -0.1909 -0.24 0.1046
-0.349 0.3799 0.3773 -0.4495
-0.1046 -1.4036 1.0466 -1.1421
0.5564 -1.5497 0.6812 -2.1121
-1.2355 -1.8314 1.4155 -2.4794
-2.5076 -2.6744 0.5391 0.729
-0.9045 -1.1197 -0.3979 0.8372
-1.5099 1.189 -0.4839 -0.8595
0.7355 -0.6012 -0.157 -1.0803
-0.5958 0.6748 -0.1127 -0.1775
|