back TFDP1_f1 HOCOMOCO-build9-MAR2012


UniProt TFDP1
motif weight7.0
total sequences7
data sources TRANSFAC20112:7
motif logo
consensusRWWKRGCGGGAAAY
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    4.6767     0.4526     1.4181     0.4526 
    3.2586        0.0     0.9655     2.7759 
    3.1379        0.0     1.0862     2.7759 
    1.0862        0.0     2.0517     3.8621 
    2.0517     1.0862     3.8621        0.0 
       0.0        0.0        7.0        0.0 
       0.0        7.0        0.0        0.0 
       0.0        0.0        7.0        0.0 
       0.0     1.8103     5.1897        0.0 
       0.0        0.0     6.0345     0.9655 
    5.9138     1.0862        0.0        0.0 
    4.9483        0.0     2.0517        0.0 
    4.9483        0.0     2.0517        0.0 
    1.2672      3.319      0.181     2.2328 
PPM
     A          C          G          T    
    0.6681     0.0647     0.2026     0.0647 
    0.4655        0.0     0.1379     0.3966 
    0.4483        0.0     0.1552     0.3966 
    0.1552        0.0     0.2931     0.5517 
    0.2931     0.1552     0.5517        0.0 
       0.0        0.0        1.0        0.0 
       0.0        1.0        0.0        0.0 
       0.0        0.0        1.0        0.0 
       0.0     0.2586     0.7414        0.0 
       0.0        0.0     0.8621     0.1379 
    0.8448     0.1552        0.0        0.0 
    0.7069        0.0     0.2931        0.0 
    0.7069        0.0     0.2931        0.0 
     0.181     0.4741     0.0259      0.319 
PWM uniform
     A          C          G          T    
    0.8367    -0.8678    -0.1606    -0.8678 
    0.5155    -1.5255     -0.432     0.3775 
    0.4828    -1.5255    -0.3521     0.3775 
   -0.3521    -1.5255     0.1266     0.6649 
    0.1266    -0.3521     0.6649    -1.5255 
   -1.5255    -1.5255     1.2082    -1.5255 
   -1.5255     1.2082    -1.5255    -1.5255 
   -1.5255    -1.5255     1.2082    -1.5255 
   -1.5255     0.0266     0.9314    -1.5255 
   -1.5255    -1.5255     1.0701     -0.432 
    1.0514    -0.3521    -1.5255    -1.5255 
    0.8879    -1.5255     0.1266    -1.5255 
    0.8879    -1.5255     0.1266    -1.5255 
   -0.2432     0.5315    -1.2091     0.1954 
PWM hg19
     A          C          G          T    
    0.6976    -0.7754    -0.0213    -0.9393 
    0.3824    -1.5255    -0.3066     0.2475 
    0.3503    -1.5255    -0.2222     0.2475 
   -0.4563    -1.5255      0.277     0.5288 
    0.0034    -0.2222     0.8291    -1.5255 
   -1.5255    -1.5255     1.3803    -1.5255 
   -1.5255     1.3803    -1.5255    -1.5255 
   -1.5255    -1.5255     1.3803    -1.5255 
   -1.5255     0.1736        1.1    -1.5255 
   -1.5255    -1.5255     1.2406    -0.5321 
    0.9094    -0.2222    -1.5255    -1.5255 
    0.7481    -1.5255      0.277    -1.5255 
    0.7481    -1.5255      0.277    -1.5255 
   -0.3525      0.693    -1.1561     0.0703