back SRY_f1 HOCOMOCO-build9-MAR2012


UniProt SRY
motif weight108.0
total sequences108
data sources JASPAR:28
TRANSFAC20112:80
motif logo
consensusbWTTGTWWh
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   11.2674    30.8203    15.2275    50.6848 
   39.6003     3.9601     4.8052    59.6344 
    8.4174     0.4971     4.4572    94.6283 
   10.2567     0.4971     3.2641     93.982 
       0.0     7.9202    98.2901     1.7896 
    5.9655        0.0     3.7781    98.2564 
   20.7948      4.341     3.6787    79.1855 
   28.1514    10.2239     7.5394    62.0854 
   36.6016    26.1309     2.8336    42.4339 
PPM
     A          C          G          T    
    0.1043     0.2854      0.141     0.4693 
    0.3667     0.0367     0.0445     0.5522 
    0.0779     0.0046     0.0413     0.8762 
     0.095     0.0046     0.0302     0.8702 
       0.0     0.0733     0.9101     0.0166 
    0.0552        0.0      0.035     0.9098 
    0.1925     0.0402     0.0341     0.7332 
    0.2607     0.0947     0.0698     0.5749 
    0.3389      0.242     0.0262     0.3929 
PWM uniform
     A          C          G          T    
   -0.8175     0.1272    -0.5411     0.6102 
    0.3697     -1.703    -1.5506     0.7694 
   -1.0778    -2.8269    -1.6106      1.224 
   -0.9023    -2.8269    -1.8488     1.2172 
   -3.1808     -1.131     1.2615     -2.253 
   -1.3731    -3.1808    -1.7392     1.2611 
   -0.2488    -1.6314    -1.7595     1.0482 
    0.0401    -0.9052    -1.1738     0.8089 
    0.2933    -0.0313    -1.9509     0.4369 
PWM hg19
     A          C          G          T    
   -0.9566     0.3041    -0.3701     0.4593 
    0.2198    -1.5589    -1.4008     0.6179 
   -1.2122    -2.7687    -1.4629     1.0714 
   -1.0399    -2.7687    -1.7109     1.0646 
   -3.1808    -0.9698     1.4426    -2.3436 
   -1.5007    -3.1808    -1.5965     1.1085 
   -0.3946    -1.4846    -1.6176      0.896 
   -0.1079    -0.7395    -1.0135     0.6573 
    0.1438     0.1445     -1.818     0.2867