back SRBP2_f1 HOCOMOCO-build9-MAR2012


UniProt SRBP2
motif weight2342.0
total sequences2345
data sources TRANSFAC20112:50
YALECHIPSEQV3:2295
motif logo
consensusvvvWGGvSWGRnb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   609.707   577.9041   878.3336   276.0553 
  405.7205   707.1756   964.9519    264.152 
  494.2055    386.733  1331.9325   129.1291 
  350.4039   113.6905   143.5317  1734.3739 
   50.2441    77.7377  2128.8594    85.1588 
  121.6557     13.366  2201.5227     5.4555 
  411.3371    516.625  1149.0691   264.9687 
  260.0051   537.9001  1514.6904    29.4044 
  677.9442   351.2166    25.8046  1287.0345 
   58.5924   183.5204  2042.5509    57.3363 
 1637.5427    46.9708    526.174   131.3124 
  368.5121   440.0312   865.3365   668.1202 
  371.1053   490.7931    1055.59   424.5116 
PPM
     A          C          G          T    
    0.2603     0.2468      0.375     0.1179 
    0.1732      0.302      0.412     0.1128 
     0.211     0.1651     0.5687     0.0551 
    0.1496     0.0485     0.0613     0.7406 
    0.0215     0.0332      0.909     0.0364 
    0.0519     0.0057       0.94     0.0023 
    0.1756     0.2206     0.4906     0.1131 
     0.111     0.2297     0.6468     0.0126 
    0.2895       0.15      0.011     0.5495 
     0.025     0.0784     0.8721     0.0245 
    0.6992     0.0201     0.2247     0.0561 
    0.1573     0.1879     0.3695     0.2853 
    0.1585     0.2096     0.4507     0.1813 
PWM uniform
     A          C          G          T    
    0.0404     -0.013     0.4045    -0.7482 
   -0.3653     0.1882     0.4983    -0.7919 
   -0.1689     -0.413     0.8201    -1.5001 
   -0.5112    -1.6254    -1.3958     1.0837 
    -2.421    -1.9978     1.2885    -1.9087 
   -1.5588    -3.6475      1.322    -4.3749 
   -0.3517    -0.1247     0.6726    -0.7889 
   -0.8076    -0.0845     0.9485    -2.9307 
    0.1461    -0.5089    -3.0527     0.7858 
   -2.2726    -1.1529     1.2471    -2.2936 
    1.0264    -2.4858    -0.1065    -1.4835 
   -0.4611    -0.2845     0.3896     0.1316 
   -0.4541    -0.1758     0.5879    -0.3203 
PWM hg19
     A          C          G          T    
   -0.1137     0.1695     0.5871    -0.9017 
   -0.5192     0.3708      0.681    -0.9454 
   -0.3229    -0.2308     1.0029    -1.6522 
   -0.6649    -1.4452     -1.215     0.9293 
   -2.5695    -1.8188     1.4714    -2.0597 
   -1.7108    -3.4859     1.5049    -4.4867 
   -0.5055     0.0577     0.8554    -0.9423 
   -0.9611     0.0979     1.1313    -3.0751 
    -0.008    -0.3267    -2.8815     0.6314 
   -2.4219    -0.9716       1.43    -2.4428 
    0.8719    -2.3094      0.076    -1.6358 
   -0.6148    -0.1022     0.5722    -0.0226 
   -0.6079     0.0066     0.7706    -0.4742