| UniProt |
SRBP1
|
| motif weight | 2169.70393 |
| total sequences | 2188 |
| data sources |
TRANSFAC20112:113 YALECHIPSEQV3:2075 |
| motif logo |
|
| consensus | vRTSRSSWGWb |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
428.377 462.0895 989.4967 289.7407
502.4408 461.5527 1167.9323 37.7782
46.24 120.6471 54.0113 1948.8055
143.2632 538.7826 1374.386 113.2721
605.5693 6.8468 1440.052 117.2358
145.8019 591.3277 1242.8381 189.7362
84.199 681.6679 1397.5476 6.2895
212.6674 176.7482 108.0778 1672.2105
6.8582 51.5138 2096.5332 14.7987
1719.6469 60.7495 113.3353 275.9722
73.0363 505.389 932.9299 658.3487
|
| PPM | A C G T
0.1974 0.213 0.4561 0.1335
0.2316 0.2127 0.5383 0.0174
0.0213 0.0556 0.0249 0.8982
0.066 0.2483 0.6334 0.0522
0.2791 0.0032 0.6637 0.054
0.0672 0.2725 0.5728 0.0874
0.0388 0.3142 0.6441 0.0029
0.098 0.0815 0.0498 0.7707
0.0032 0.0237 0.9663 0.0068
0.7926 0.028 0.0522 0.1272
0.0337 0.2329 0.43 0.3034
|
| PWM uniform | A C G T
-0.2351 -0.1597 0.5995 -0.624
-0.0763 -0.1608 0.765 -2.6183
-2.425 -1.4909 -2.2755 1.2764
-1.3216 -0.0067 0.9276 -1.553
0.1097 -4.1285 0.9742 -1.5191
-1.3043 0.086 0.8271 -1.0439
-1.8438 0.2278 0.9443 -4.1942
-0.9309 -1.1141 -1.5991 1.1235
-4.1272 -2.3211 1.3494 -3.483
1.1514 -2.1617 -1.5524 -0.6724
-1.9827 -0.0705 0.5408 0.1931
|
| PWM hg19 | A C G T
-0.389 0.0227 0.7823 -0.7776
-0.2303 0.0215 0.9478 -2.7649
-2.5731 -1.3105 -2.0982 1.1219
-1.474 0.1757 1.1104 -1.7049
-0.0444 -3.9828 1.157 -1.6711
-1.4567 0.2685 1.0099 -1.1969
-1.9948 0.4103 1.1271 -4.3105
-1.084 -0.9328 -1.419 0.969
-4.246 -2.1441 1.5323 -3.6187
0.9969 -1.9838 -1.3722 -0.8259
-2.1331 0.1119 0.7235 0.0389
|