| UniProt |
SP1
|
| motif weight | 3488.65597 |
| total sequences | 3637 |
| data sources |
HUDSONALPHACHIPSEQV2:2000 JASPAR:35 TRANSFAC20112:1602 |
| motif logo |
|
| consensus | RKGGGMGGRRv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
682.6436 443.1455 2075.6553 287.2115
299.8883 103.7434 2613.8927 471.1316
591.4892 42.6318 2845.1654 9.3695
7.0711 45.2909 3432.8848 3.4092
91.309 19.1536 3373.6569 4.5364
809.2083 2246.942 61.3077 371.1981
120.5648 42.4349 3242.1561 83.5002
13.7252 35.8582 3332.4067 106.6658
558.1188 90.0085 2694.855 145.6737
264.0088 254.7176 2796.8809 173.0487
519.4601 1874.9349 654.5411 439.7198
|
| PPM | A C G T
0.1957 0.127 0.595 0.0823
0.086 0.0297 0.7493 0.135
0.1695 0.0122 0.8155 0.0027
0.002 0.013 0.984 0.001
0.0262 0.0055 0.967 0.0013
0.232 0.6441 0.0176 0.1064
0.0346 0.0122 0.9293 0.0239
0.0039 0.0103 0.9552 0.0306
0.16 0.0258 0.7725 0.0418
0.0757 0.073 0.8017 0.0496
0.1489 0.5374 0.1876 0.126
|
| PWM uniform | A C G T
-0.2444 -0.6748 0.8657 -1.106
-1.0631 -2.1119 1.0961 -0.6139
-0.3872 -2.974 1.1808 -4.3389
-4.5639 -2.9162 1.3684 -5.078
-2.237 -3.7196 1.351 -4.8899
-0.0747 0.9449 -2.6247 -0.8511
-1.9644 -2.9784 1.3113 -2.3243
-4.0155 -3.1384 1.3387 -2.0847
-0.4451 -2.251 1.1265 -1.778
-1.1896 -1.2252 1.1637 -1.608
-0.5166 0.7641 -0.2863 -0.6825
|
| PWM hg19 | A C G T
-0.3985 -0.4926 1.0486 -1.2595
-1.2167 -1.9321 1.279 -0.7678
-0.5413 -2.7986 1.3637 -4.4641
-4.6818 -2.7404 1.5514 -5.1719
-2.388 -3.5528 1.534 -4.994
-0.229 1.1278 -2.447 -1.0048
-2.1162 -2.8031 1.4942 -2.475
-4.1488 -2.9644 1.5217 -2.2362
-0.5991 -2.0717 1.3095 -1.9304
-1.343 -1.0435 1.3466 -1.7607
-0.6706 0.947 -0.1038 -0.8364
|