back SP1_f1 HOCOMOCO-build9-MAR2012


UniProt SP1
motif weight3488.65597
total sequences3637
data sources HUDSONALPHACHIPSEQV2:2000
JASPAR:35
TRANSFAC20112:1602
motif logo
consensusRKGGGMGGRRv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
  682.6436   443.1455  2075.6553   287.2115 
  299.8883   103.7434  2613.8927   471.1316 
  591.4892    42.6318  2845.1654     9.3695 
    7.0711    45.2909  3432.8848     3.4092 
    91.309    19.1536  3373.6569     4.5364 
  809.2083   2246.942    61.3077   371.1981 
  120.5648    42.4349  3242.1561    83.5002 
   13.7252    35.8582  3332.4067   106.6658 
  558.1188    90.0085   2694.855   145.6737 
  264.0088   254.7176  2796.8809   173.0487 
  519.4601  1874.9349   654.5411   439.7198 
PPM
     A          C          G          T    
    0.1957      0.127      0.595     0.0823 
     0.086     0.0297     0.7493      0.135 
    0.1695     0.0122     0.8155     0.0027 
     0.002      0.013      0.984      0.001 
    0.0262     0.0055      0.967     0.0013 
     0.232     0.6441     0.0176     0.1064 
    0.0346     0.0122     0.9293     0.0239 
    0.0039     0.0103     0.9552     0.0306 
      0.16     0.0258     0.7725     0.0418 
    0.0757      0.073     0.8017     0.0496 
    0.1489     0.5374     0.1876      0.126 
PWM uniform
     A          C          G          T    
   -0.2444    -0.6748     0.8657     -1.106 
   -1.0631    -2.1119     1.0961    -0.6139 
   -0.3872     -2.974     1.1808    -4.3389 
   -4.5639    -2.9162     1.3684     -5.078 
    -2.237    -3.7196      1.351    -4.8899 
   -0.0747     0.9449    -2.6247    -0.8511 
   -1.9644    -2.9784     1.3113    -2.3243 
   -4.0155    -3.1384     1.3387    -2.0847 
   -0.4451     -2.251     1.1265     -1.778 
   -1.1896    -1.2252     1.1637     -1.608 
   -0.5166     0.7641    -0.2863    -0.6825 
PWM hg19
     A          C          G          T    
   -0.3985    -0.4926     1.0486    -1.2595 
   -1.2167    -1.9321      1.279    -0.7678 
   -0.5413    -2.7986     1.3637    -4.4641 
   -4.6818    -2.7404     1.5514    -5.1719 
    -2.388    -3.5528      1.534     -4.994 
    -0.229     1.1278     -2.447    -1.0048 
   -2.1162    -2.8031     1.4942     -2.475 
   -4.1488    -2.9644     1.5217    -2.2362 
   -0.5991    -2.0717     1.3095    -1.9304 
    -1.343    -1.0435     1.3466    -1.7607 
   -0.6706      0.947    -0.1038    -0.8364