back SOX9_f1 HOCOMOCO-build9-MAR2012


UniProt SOX9
motif weight160.00572
total sequences203
data sources JASPAR:76
TRANSFAC20112:127
motif logo
consensusdRAACAATRRv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   94.9771    19.0132    19.1046    26.9109 
   49.6178     6.7274    88.2484    15.4121 
  134.5203     8.8116     5.4302    11.2437 
  154.6314        0.0     0.8225     4.5518 
       0.0    158.744        0.0     1.2617 
  155.3981        0.0     3.3459     1.2617 
  154.9234     2.1756     0.8225     2.0842 
   15.9223        0.0        0.0   144.0834 
   49.7651     2.0842   101.9037     6.2527 
   23.7668    16.8007   115.7089     3.7293 
   54.8608    24.4198    60.4178    20.3073 
PPM
     A          C          G          T    
    0.5936     0.1188     0.1194     0.1682 
    0.3101      0.042     0.5515     0.0963 
    0.8407     0.0551     0.0339     0.0703 
    0.9664        0.0     0.0051     0.0284 
       0.0     0.9921        0.0     0.0079 
    0.9712        0.0     0.0209     0.0079 
    0.9682     0.0136     0.0051      0.013 
    0.0995        0.0        0.0     0.9005 
     0.311      0.013     0.6369     0.0391 
    0.1485      0.105     0.7232     0.0233 
    0.3429     0.1526     0.3776     0.1269 
PWM uniform
     A          C          G          T    
    0.8468    -0.7104    -0.7059    -0.3815 
    0.2095    -1.6412     0.7743    -0.9059 
     1.191    -1.4095    -1.8182    -1.1934 
    1.3291    -3.4821    -2.9823    -1.9587 
   -3.4821     1.3551    -3.4821    -2.7917 
     1.334    -3.4821    -2.1909    -2.7917 
    1.3309    -2.4834    -2.9823    -2.5103 
   -0.8757    -3.4821    -3.4821      1.259 
    0.2123    -2.5103     0.9163    -1.7024 
   -0.4998    -0.8259     1.0418    -2.1111 
    0.3075    -0.4741     0.4019    -0.6486 
PWM hg19
     A          C          G          T    
    0.6943    -0.5379    -0.5333    -0.5287 
     0.059     -1.485      0.955    -1.0479 
    1.0379    -1.2478    -1.6673    -1.3313 
    1.1758    -3.4821    -2.9063    -2.0776 
   -3.4821     1.5368    -3.4821    -2.8658 
    1.1807    -3.4821    -2.0549    -2.8658 
    1.1776    -2.3639    -2.9063    -2.6036 
   -1.0181    -3.4821    -3.4821     1.1058 
    0.0618    -2.3926     1.0972    -1.8292 
   -0.6461    -0.6547     1.2231    -2.2242 
    0.1566    -0.2994     0.5815    -0.7934