back SOX5_f1 HOCOMOCO-build9-MAR2012


UniProt SOX5
motif weight69.42966
total sequences71
data sources JASPAR:23
TRANSFAC20112:48
motif logo
consensusdAACAATv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   23.2796     9.0839    10.8369    26.2293 
   61.1582     1.4831      2.958     3.8304 
   64.9886        0.0     3.6559     0.7852 
    1.5703    62.4586     2.3555     3.0452 
   67.8593        0.0     0.7852     0.7852 
   62.5458     4.5283     2.3555        0.0 
     4.711     4.0131        0.0    60.7055 
   27.5392    11.1163    21.6643     9.1098
PPM
     A          C          G          T    
    0.3353     0.1308     0.1561     0.3778 
    0.8809     0.0214     0.0426     0.0552 
     0.936        0.0     0.0527     0.0113 
    0.0226     0.8996     0.0339     0.0439 
    0.9774        0.0     0.0113     0.0113 
    0.9009     0.0652     0.0339        0.0 
    0.0679     0.0578        0.0     0.8743 
    0.3966     0.1601      0.312     0.1312
PWM uniform
     A          C          G          T    
    0.2788    -0.5964     -0.437     0.3932 
    1.2173    -1.9799    -1.5225     -1.326 
    1.2771     -2.855    -1.3623    -2.3007 
   -1.9462      1.238     -1.685     -1.501 
    1.3196     -2.855    -2.3007    -2.3007 
    1.2394    -1.1926     -1.685     -2.855 
   -1.1604    -1.2893     -2.855       1.21 
    0.4401    -0.4138     0.2101    -0.5939
PWM hg19
     A          C          G          T    
    0.1314     -0.431     -0.269      0.245 
    1.0655    -1.8691    -1.3846    -1.4451 
    1.1251     -2.855    -1.2176    -2.3636 
   -2.0356     1.4183    -1.5552    -1.6134 
    1.1675     -2.855    -2.2187    -2.3636 
    1.0875    -1.0418    -1.5552     -2.855 
   -1.2848    -1.1419     -2.855     1.0583 
    0.2916    -0.2454     0.3853    -0.7312