back SOX2_f1 HOCOMOCO-build9-MAR2012

UniProt	SOX2
motif weight	633.77985
total sequences	719
data sources	JASPAR:669 TRANSFAC20112:50
motif logo
consensus	dWhWSMAKvASAAWRR
small-BiSMark	hg19 PWM
small-BiSMark	uniform PWM
thresholds	hg19 PWM
thresholds	uniform PWM
WPCM	A C G T 262.5665 103.3158 110.1883 157.7093 70.8961 60.4687 63.9435 438.4715 93.6599 132.2263 57.5987 350.2949 137.7861 34.6648 39.5296 421.7995 96.6034 99.0459 399.2065 38.924 108.8584 402.504 82.6241 39.7934 562.542 28.4973 26.93 15.8105 97.0446 26.93 103.122 406.6832 309.286 72.1959 181.489 70.8089 536.7352 35.54 2.2586 59.246 13.2044 498.3353 66.7198 55.5203 620.5755 4.1698 0.0 9.0346 623.3553 3.4748 5.5597 1.3899 292.9507 2.0849 3.4748 335.2694 160.4634 14.5943 446.2127 12.5094 86.3756 72.7364 425.1198 49.548
PPM	A C G T 0.4143 0.163 0.1739 0.2488 0.1119 0.0954 0.1009 0.6918 0.1478 0.2086 0.0909 0.5527 0.2174 0.0547 0.0624 0.6655 0.1524 0.1563 0.6299 0.0614 0.1718 0.6351 0.1304 0.0628 0.8876 0.045 0.0425 0.0249 0.1531 0.0425 0.1627 0.6417 0.488 0.1139 0.2864 0.1117 0.8469 0.0561 0.0036 0.0935 0.0208 0.7863 0.1053 0.0876 0.9792 0.0066 0.0 0.0143 0.9836 0.0055 0.0088 0.0022 0.4622 0.0033 0.0055 0.529 0.2532 0.023 0.7041 0.0197 0.1363 0.1148 0.6708 0.0782
PWM uniform	A C G T 0.5011 -0.4223 -0.3588 -0.0046 -0.7918 -0.9471 -0.8926 1.0114 -0.5188 -0.1789 -0.9944 0.7878 -0.1382 -1.4843 -1.3585 0.9728 -0.4884 -0.4638 0.918 -1.3733 -0.3708 0.9262 -0.6419 -1.3521 1.2598 -1.6707 -1.7241 -2.2177 -0.4839 -1.7241 -0.4241 0.9365 0.6639 -0.7741 0.1345 -0.793 1.213 -1.4605 -3.7219 -0.967 -2.3797 1.139 -0.8511 -1.0301 1.3577 -3.3207 -4.5975 -2.7102 1.3622 -3.4487 -3.1053 -3.976 0.61 -3.7678 -3.4487 0.7442 0.0125 -2.2901 1.0289 -2.4278 -0.5983 -0.7668 0.9806 -1.1406
PWM hg19	A C G T 0.3475 -0.2418 -0.1782 -0.1576 -0.9428 -0.7684 -0.7137 0.8574 -0.6706 0.0021 -0.8159 0.6339 -0.2909 -1.3088 -1.182 0.8188 -0.6403 -0.2834 1.1003 -1.5214 -0.523 1.1085 -0.4621 -1.5003 1.1056 -1.4966 -1.5506 -2.357 -0.6358 -1.5506 -0.2436 0.7825 0.5101 -0.5947 0.3161 -0.944 1.0588 -1.2847 -3.6111 -1.1172 -2.5164 1.3215 -0.6721 -1.1801 1.2035 -3.1854 -4.5975 -2.8398 1.2079 -3.3201 -2.9606 -4.0446 0.4562 -3.6605 -3.3201 0.5903 -0.1405 -2.1238 1.2113 -2.5635 -0.7499 -0.5874 1.163 -1.29