| UniProt |
SOX18
|
| motif weight | 8.0 |
| total sequences | 9 |
| data sources |
TRANSFAC20112:9
|
| motif logo |
|
| consensus | GRRnnWvRACAATKndWKS |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
0.5205 0.5205 6.4384 0.5205
1.9726 0.9863 5.0411 0.0
5.0411 0.9863 1.9726 0.0
3.0685 2.9589 0.9863 0.9863
3.0685 0.9863 2.9589 0.9863
5.0411 0.0 0.9863 1.9726
2.0822 1.9726 2.9589 0.9863
4.9315 0.0 2.0822 0.9863
6.0274 0.0 0.0 1.9726
0.0 8.0 0.0 0.0
8.0 0.0 0.0 0.0
8.0 0.0 0.0 0.0
2.9589 0.0 0.0 5.0411
0.0 0.9863 3.9452 3.0685
0.9863 1.9726 3.0685 1.9726
1.9726 0.9863 2.9589 2.0822
2.9589 0.9863 0.0 4.0548
1.9726 0.0 2.9589 3.0685
0.2466 4.3014 2.2192 1.2329
|
| PPM | A C G T
0.0651 0.0651 0.8048 0.0651
0.2466 0.1233 0.6301 0.0
0.6301 0.1233 0.2466 0.0
0.3836 0.3699 0.1233 0.1233
0.3836 0.1233 0.3699 0.1233
0.6301 0.0 0.1233 0.2466
0.2603 0.2466 0.3699 0.1233
0.6164 0.0 0.2603 0.1233
0.7534 0.0 0.0 0.2466
0.0 1.0 0.0 0.0
1.0 0.0 0.0 0.0
1.0 0.0 0.0 0.0
0.3699 0.0 0.0 0.6301
0.0 0.1233 0.4932 0.3836
0.1233 0.2466 0.3836 0.2466
0.2466 0.1233 0.3699 0.2603
0.3699 0.1233 0.0 0.5068
0.2466 0.0 0.3699 0.3836
0.0308 0.5377 0.2774 0.1541
|
| PWM uniform | A C G T
-0.8846 -0.8846 1.0157 -0.8846
-0.0109 -0.5146 0.7916 -1.5784
0.7916 -0.5146 -0.0109 -1.5784
0.3535 0.3225 -0.5146 -0.5146
0.3535 -0.5146 0.3225 -0.5146
0.7916 -1.5784 -0.5146 -0.0109
0.0321 -0.0109 0.3225 -0.5146
0.7717 -1.5784 0.0321 -0.5146
0.9548 -1.5784 -1.5784 -0.0109
-1.5784 1.2182 -1.5784 -1.5784
1.2182 -1.5784 -1.5784 -1.5784
1.2182 -1.5784 -1.5784 -1.5784
0.3225 -1.5784 -1.5784 0.7916
-1.5784 -0.5146 0.5721 0.3535
-0.5146 -0.0109 0.3535 -0.0109
-0.0109 -0.5146 0.3225 0.0321
0.3225 -0.5146 -1.5784 0.5963
-0.0109 -1.5784 0.3225 0.3535
-1.1902 0.6488 0.0834 -0.363
|
| PWM hg19 | A C G T
-0.959 -0.7888 1.1862 -0.959
-0.1313 -0.3911 0.9588 -1.5784
0.6524 -0.3911 0.1366 -1.5784
0.2228 0.4802 -0.3911 -0.6132
0.2228 -0.3911 0.4802 -0.6132
0.6524 -1.5784 -0.3911 -0.1313
-0.0897 0.1366 0.4802 -0.6132
0.6328 -1.5784 0.1811 -0.6132
0.8134 -1.5784 -1.5784 -0.1313
-1.5784 1.391 -1.5784 -1.5784
1.0737 -1.5784 -1.5784 -1.5784
1.0737 -1.5784 -1.5784 -1.5784
0.1925 -1.5784 -1.5784 0.6524
-1.5784 -0.3911 0.7355 0.2228
-0.6132 0.1366 0.512 -0.1313
-0.1313 -0.3911 0.4802 -0.0897
0.1925 -0.3911 -1.5784 0.4605
-0.1313 -1.5784 0.4802 0.2228
-1.2374 0.8137 0.2342 -0.4693
|
