| UniProt |
SOX17
|
| motif weight | 57.03021 |
| total sequences | 67 |
| data sources |
JASPAR:31 TRANSFAC20112:36 |
| motif logo |
|
| consensus | bSACAATRRdnWTTGKTK |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
8.8238 16.0688 23.2104 8.9272
4.8647 11.7993 40.3662 0.0
57.0302 0.0 0.0 0.0
0.0 57.0302 0.0 0.0
57.0302 0.0 0.0 0.0
57.0302 0.0 0.0 0.0
0.0 0.0 0.0 57.0302
10.8678 1.9666 40.2627 3.9331
21.6321 0.0 20.7006 14.6975
18.7341 5.8997 17.699 14.6975
12.7309 15.7325 16.7675 11.7993
36.4331 5.8997 0.0 14.6975
11.7993 3.0016 0.0 42.2293
0.0 0.0 8.7978 48.2324
0.0 0.0 35.3981 21.6321
1.9666 0.0 17.699 37.3646
0.0 2.8981 8.9013 45.2308
4.5542 4.5542 39.4345 8.4873
|
| PPM | A C G T
0.1547 0.2818 0.407 0.1565
0.0853 0.2069 0.7078 0.0
1.0 0.0 0.0 0.0
0.0 1.0 0.0 0.0
1.0 0.0 0.0 0.0
1.0 0.0 0.0 0.0
0.0 0.0 0.0 1.0
0.1906 0.0345 0.706 0.069
0.3793 0.0 0.363 0.2577
0.3285 0.1034 0.3103 0.2577
0.2232 0.2759 0.294 0.2069
0.6388 0.1034 0.0 0.2577
0.2069 0.0526 0.0 0.7405
0.0 0.0 0.1543 0.8457
0.0 0.0 0.6207 0.3793
0.0345 0.0 0.3103 0.6552
0.0 0.0508 0.1561 0.7931
0.0799 0.0799 0.6915 0.1488
|
| PWM uniform | A C G T
-0.4399 0.1121 0.4614 -0.4294
-0.955 -0.1755 0.9969 -2.715
1.3354 -2.715 -2.715 -2.715
-2.715 1.3354 -2.715 -2.715
1.3354 -2.715 -2.715 -2.715
1.3354 -2.715 -2.715 -2.715
-2.715 -2.715 -2.715 1.3354
-0.251 -1.6347 0.9944 -1.1276
0.3941 -2.715 0.3521 0.0284
0.2571 -0.7927 0.2033 0.0284
-0.1053 0.0922 0.1522 -0.1755
0.8971 -0.7927 -2.715 0.0284
-0.1755 -1.3364 -2.715 1.041
-2.715 -2.715 -0.4425 1.171
-2.715 -2.715 0.869 0.3941
-1.6347 -2.715 0.2033 0.9216
-2.715 -1.3625 -0.432 1.1081
-1.0093 -1.0093 0.9742 -0.4747
|
| PWM hg19 | A C G T
-0.5775 0.2852 0.6375 -0.5672
-1.0813 -0.0058 1.1759 -2.715
1.1836 -2.715 -2.715 -2.715
-2.715 1.5155 -2.715 -2.715
1.1836 -2.715 -2.715 -2.715
1.1836 -2.715 -2.715 -2.715
-2.715 -2.715 -2.715 1.1836
-0.3916 -1.5101 1.1734 -1.2486
0.2468 -2.715 0.5273 -0.1156
0.111 -0.6345 0.3772 -0.1156
-0.2478 0.2651 0.3257 -0.3171
0.7469 -0.6345 -2.715 -0.1156
-0.3171 -1.1964 -2.715 0.8902
-2.715 -2.715 -0.2769 1.0198
-2.715 -2.715 1.0474 0.2468
-1.7341 -2.715 0.3772 0.7714
-2.715 -1.2237 -0.2662 0.9571
-1.134 -0.8571 1.153 -0.6117
|