back SOX13_f1 HOCOMOCO-build9-MAR2012


UniProt SOX13
motif weight5.0
total sequences5
data sources TRANSFAC20112:5
motif logo
consensusnMACAATn
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    1.5179     0.8036      1.875     0.8036 
    3.2143     1.0714     0.7143        0.0 
       5.0        0.0        0.0        0.0 
       0.0     3.9286        0.0     1.0714 
       5.0        0.0        0.0        0.0 
       5.0        0.0        0.0        0.0 
    1.0714        0.0        0.0     3.9286 
    1.5179     0.8036      1.875     0.8036 
PPM
     A          C          G          T    
    0.3036     0.1607      0.375     0.1607 
    0.6429     0.2143     0.1429        0.0 
       1.0        0.0        0.0        0.0 
       0.0     0.7857        0.0     0.2143 
       1.0        0.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
    0.2143        0.0        0.0     0.7857 
    0.3036     0.1607      0.375     0.1607 
PWM uniform
     A          C          G          T    
    0.1502     -0.315     0.3208     -0.315 
    0.7833    -0.1144    -0.3919    -1.4126 
    1.1846    -1.4126    -1.4126    -1.4126 
   -1.4126     0.9636    -1.4126    -0.1144 
    1.1846    -1.4126    -1.4126    -1.4126 
    1.1846    -1.4126    -1.4126    -1.4126 
   -0.1144    -1.4126    -1.4126     0.9636 
    0.1502     -0.315     0.3208     -0.315 
PWM hg19
     A          C          G          T    
      0.03    -0.1893     0.4739    -0.4153 
    0.6471     0.0219     -0.271    -1.4126 
    1.0424    -1.4126    -1.4126    -1.4126 
   -1.4126      1.131    -1.4126    -0.2244 
    1.0424    -1.4126    -1.4126    -1.4126 
    1.0424    -1.4126    -1.4126    -1.4126 
   -0.2244    -1.4126    -1.4126     0.8243 
      0.03    -0.1893     0.4739    -0.4153