back SNAI2_f1 HOCOMOCO-build9-MAR2012


UniProt SNAI2
motif weight6.0
total sequences6
data sources TRANSFAC20112:6
motif logo
consensusnCAGGTG
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
      0.25       2.25       1.25       2.25 
       0.0        6.0        0.0        0.0 
       6.0        0.0        0.0        0.0 
       0.0        0.0        6.0        0.0 
       0.0        0.0        6.0        0.0 
       0.0        0.0        0.0        6.0 
       0.0        0.0        6.0        0.0
PPM
     A          C          G          T    
    0.0417      0.375     0.2083      0.375 
       0.0        1.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
       0.0        0.0        1.0        0.0 
       0.0        0.0        1.0        0.0 
       0.0        0.0        0.0        1.0 
       0.0        0.0        1.0        0.0
PWM uniform
     A          C          G          T    
   -1.0264     0.3257    -0.1374     0.3257 
   -1.4699      1.197    -1.4699    -1.4699 
     1.197    -1.4699    -1.4699    -1.4699 
   -1.4699    -1.4699      1.197    -1.4699 
   -1.4699    -1.4699      1.197    -1.4699 
   -1.4699    -1.4699    -1.4699      1.197 
   -1.4699    -1.4699      1.197    -1.4699
PWM hg19
     A          C          G          T    
   -1.0791     0.4806     0.0005     0.1984 
   -1.4699     1.3683    -1.4699    -1.4699 
    1.0539    -1.4699    -1.4699    -1.4699 
   -1.4699    -1.4699     1.3683    -1.4699 
   -1.4699    -1.4699     1.3683    -1.4699 
   -1.4699    -1.4699    -1.4699     1.0539 
   -1.4699    -1.4699     1.3683    -1.4699