| UniProt |
SMRC1
|
| motif weight | 2116.0 |
| total sequences | 2116 |
| data sources |
YALECHIPSEQV3:2116
|
| motif logo |
|
| consensus | vTGAGTCAb |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
556.4194 741.0239 617.5675 200.9892
106.6969 14.8676 103.0023 1891.4332
33.4298 25.5587 1970.4832 86.5283
1982.8342 30.1279 54.8834 48.1546
271.8825 0.0 1844.1175 0.0
149.0329 57.2572 195.6169 1714.093
70.7326 1976.4623 44.228 24.577
1963.3082 83.3335 14.9211 54.4372
128.5074 840.4922 524.9529 622.0474
|
| PPM | A C G T
0.263 0.3502 0.2919 0.095
0.0504 0.007 0.0487 0.8939
0.0158 0.0121 0.9312 0.0409
0.9371 0.0142 0.0259 0.0228
0.1285 0.0 0.8715 0.0
0.0704 0.0271 0.0924 0.8101
0.0334 0.9341 0.0209 0.0116
0.9278 0.0394 0.0071 0.0257
0.0607 0.3972 0.2481 0.294
|
| PWM uniform | A C G T
0.0504 0.336 0.1543 -0.9619
-1.5868 -3.4543 -1.6214 1.2715
-2.7095 -2.9614 1.3124 -1.7922
1.3186 -2.8075 -2.2351 -2.3612
-0.6622 -5.6252 1.2462 -5.6252
-1.2577 -2.1942 -0.9887 1.1732
-1.989 1.3154 -2.4429 -2.9978
1.3088 -1.829 -3.4511 -2.243
-1.4038 0.4617 -0.0077 0.1615
|
| PWM hg19 | A C G T
-0.1037 0.5186 0.3368 -1.115
-1.7385 -3.2905 -1.4415 1.117
-2.8551 -2.7901 1.4953 -1.9433
1.1641 -2.6346 -2.0577 -2.5095
-0.8157 -5.6252 1.4291 -5.6252
-1.4102 -2.0166 -0.8073 1.0187
-2.1393 1.4983 -2.2668 -3.1404
1.1543 -1.6498 -3.2873 -2.392
-1.556 0.6443 0.1748 0.0073
|
