| UniProt |
SMAD1
|
| motif weight | 11.93939 |
| total sequences | 18 |
| data sources |
TRANSFAC20112:18
|
| motif logo |
|
| consensus | RGCCTSTCTGYM |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
5.2424 0.2727 3.9697 2.4545
0.0 5.7576 6.1818 0.0
0.9697 8.7879 0.0 2.1818
1.9394 8.9091 1.0909 0.0
0.9697 0.9697 0.0 10.0
0.9697 3.1515 7.2727 0.5455
0.0 0.5455 0.0 11.3939
0.0 9.7576 2.1818 0.0
1.0909 0.0 0.0 10.8485
0.0 0.0 10.8485 1.0909
1.0909 7.697 0.9697 2.1818
3.1515 6.6061 0.0 2.1818
|
| PPM | A C G T
0.4391 0.0228 0.3325 0.2056
0.0 0.4822 0.5178 0.0
0.0812 0.736 0.0 0.1827
0.1624 0.7462 0.0914 0.0
0.0812 0.0812 0.0 0.8376
0.0812 0.264 0.6091 0.0457
0.0 0.0457 0.0 0.9543
0.0 0.8173 0.1827 0.0
0.0914 0.0 0.0 0.9086
0.0 0.0 0.9086 0.0914
0.0914 0.6447 0.0812 0.1827
0.264 0.5533 0.0 0.1827
|
| PWM uniform | A C G T
0.4863 -1.3958 0.2415 -0.1591
-1.7604 0.5705 0.6349 -1.7604
-0.8188 0.9593 -1.7604 -0.252
-0.3425 0.9721 -0.7453 -1.7604
-0.8188 -0.8188 -1.7604 1.0805
-0.8188 0.0452 0.7837 -1.1292
-1.7604 -1.1292 -1.7604 1.2038
-1.7604 1.0574 -0.252 -1.7604
-0.7453 -1.7604 -1.7604 1.1573
-1.7604 -1.7604 1.1573 -0.7453
-0.7453 0.836 -0.8188 -0.252
0.0452 0.6954 -1.7604 -0.252
|
| PWM hg19 | A C G T
0.3492 -1.3362 0.4017 -0.2806
-1.7604 0.7372 0.8026 -1.7604
-0.9102 1.1312 -1.7604 -0.3703
-0.4575 1.1442 -0.6248 -1.7604
-0.9102 -0.7032 -1.7604 0.9355
-0.9102 0.2004 0.9535 -1.1986
-1.7604 -1.0393 -1.7604 1.0577
-1.7604 1.2304 -0.1067 -1.7604
-0.8411 -1.7604 -1.7604 1.0117
-1.7604 -1.7604 1.3313 -0.8411
-0.8411 1.0065 -0.7032 -0.3703
-0.0823 0.864 -1.7604 -0.3703
|
