UniProt |
RXRG
|
motif weight | 653.00413 |
total sequences | 1502 |
data sources |
PARALLELSELEX:1491 TRANSFAC20112:11 |
motif logo | |
consensus | bGTCAAAGGTCAh |
small-BiSMark | hg19 PWM |
small-BiSMark | uniform PWM |
thresholds | hg19 PWM |
thresholds | uniform PWM |
WPCM | A C G T 102.0402 102.4647 345.61 102.8892 0.849 0.4245 571.6391 80.0916 4.0687 9.379 50.4667 589.0898 3.8204 583.7648 13.1787 52.2402 653.0041 0.0 0.0 0.0 594.1662 2.6191 47.9448 8.2741 633.2229 0.849 18.9322 0.0 0.0 0.4245 651.7307 0.849 0.4245 0.4245 596.1442 56.0109 9.1952 11.5014 15.8108 616.4967 2.9714 561.3825 49.4638 39.1864 605.969 3.6442 42.7181 0.6728 190.5637 215.2555 67.0425 180.1424 |
PPM | A C G T 0.1563 0.1569 0.5293 0.1576 0.0013 0.0007 0.8754 0.1227 0.0062 0.0144 0.0773 0.9021 0.0059 0.894 0.0202 0.08 1.0 0.0 0.0 0.0 0.9099 0.004 0.0734 0.0127 0.9697 0.0013 0.029 0.0 0.0 0.0007 0.998 0.0013 0.0007 0.0007 0.9129 0.0858 0.0141 0.0176 0.0242 0.9441 0.0046 0.8597 0.0757 0.06 0.928 0.0056 0.0654 0.001 0.2918 0.3296 0.1027 0.2759 |
PWM uniform | A C G T -0.464 -0.46 0.7448 -0.4559 -4.2012 -4.3898 1.2462 -0.702 -3.3666 -2.7073 -1.1522 1.2762 -3.4112 1.2671 -2.4106 -1.1188 1.3789 -4.6225 -4.6225 -4.6225 1.2847 -3.6607 -1.2019 -2.8132 1.3482 -4.2012 -2.0822 -4.6225 -4.6225 -4.3898 1.3769 -4.2012 -4.3898 -4.3898 1.288 -1.0511 -2.7242 -2.5309 -2.2469 1.3215 -3.5809 1.2281 -1.1717 -1.3963 1.3043 -3.4442 -1.3133 -4.2752 0.1533 0.2742 -0.876 0.0975 |
PWM hg19 | A C G T -0.6161 -0.2795 0.9271 -0.608 -4.2517 -4.349 1.4287 -0.8533 -3.4747 -2.5492 -0.9744 1.122 -3.5173 1.4497 -2.246 -1.2684 1.2246 -4.6225 -4.6225 -4.6225 1.1305 -3.5438 -1.0243 -2.9408 1.194 -4.1344 -1.9124 -4.6225 -4.6225 -4.349 1.5596 -4.2517 -4.42 -4.349 1.4706 -1.2011 -2.8541 -2.3687 -2.0795 1.1673 -3.6782 1.4107 -0.994 -1.5444 1.1501 -3.314 -1.1364 -4.3182 0.0 0.4559 -0.6969 -0.0556 |