| UniProt |
RXRB
|
| motif weight | 26.0 |
| total sequences | 27 |
| data sources |
TRANSFAC20112:27
|
| motif logo |
|
| consensus | WSAGGTCAbd |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
3.7143 2.4762 3.5905 16.219
2.8476 9.781 13.3714 0.0
22.0381 1.7333 2.2286 0.0
1.1143 0.0 22.6571 2.2286
0.0 1.5476 21.9762 2.4762
1.1143 0.0 1.1143 23.7714
0.4333 22.719 1.7333 1.1143
24.8857 1.1143 0.0 0.0
2.4762 12.8762 7.9238 2.7238
10.3381 3.219 8.2333 4.2095
|
| PPM | A C G T
0.1429 0.0952 0.1381 0.6238
0.1095 0.3762 0.5143 0.0
0.8476 0.0667 0.0857 0.0
0.0429 0.0 0.8714 0.0857
0.0 0.0595 0.8452 0.0952
0.0429 0.0 0.0429 0.9143
0.0167 0.8738 0.0667 0.0429
0.9571 0.0429 0.0 0.0
0.0952 0.4952 0.3048 0.1048
0.3976 0.1238 0.3167 0.1619
|
| PWM uniform | A C G T
-0.4794 -0.7988 -0.5071 0.8453
-0.6918 0.3706 0.6624 -2.195
1.1392 -1.0546 -0.877 -2.195
-1.333 -2.195 1.1659 -0.877
-2.195 -1.1303 1.1365 -0.7988
-1.333 -2.195 -1.333 1.2123
-1.7684 1.1686 -1.0546 -1.333
1.2566 -1.333 -2.195 -2.195
-0.7988 0.6269 0.1779 -0.7262
0.4218 -0.5952 0.2127 -0.3756
|
| PWM hg19 | A C G T
-0.6044 -0.658 -0.3555 0.6986
-0.8099 0.5407 0.8358 -2.195
0.9905 -0.9265 -0.7398 -2.195
-1.4194 -2.195 1.3431 -0.9879
-2.195 -1.0067 1.3135 -0.9129
-1.4194 -2.195 -1.2232 1.0632
-1.8195 1.3458 -0.9265 -1.4194
1.1073 -1.2232 -2.195 -2.195
-0.9129 0.7999 0.3452 -0.8431
0.2793 -0.4465 0.3805 -0.5035
|
