back RREB1_si HOCOMOCO-build9-MAR2012


UniProt RREB1
motif weight26.0
total sequences27
data sources JASPAR:11
TRANSFAC20112:16
motif logo
consensusdbSKbdGKKGKTGbTKKGKGGd
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    6.8225     3.0887    10.1035     5.9852 
    2.0592     4.1183    10.7486     9.0739 
       0.0     7.0148    16.0887     2.8965 
    2.0592        0.0    14.8669     9.0739 
    2.0592     2.8965    11.9704     9.0739 
    4.1183     0.8373    11.1331     9.9113 
       0.0     0.8373     20.207     4.9556 
       0.0     3.7338    13.1922     9.0739 
       0.0     0.8373    17.3105     7.8521 
       0.0     0.8373    23.1035     2.0592 
       0.0      2.512    15.2514     8.2366 
       0.0        0.0     1.6747    24.3253 
    0.8373        0.0    24.3253     0.8373 
    2.0592      2.512    12.3549     9.0739 
       0.0     0.8373     6.1775    18.9852 
    1.6747     0.8373     4.1183    19.3697 
       0.0     0.8373     8.2366    16.9261 
       0.0     1.6747    24.3253        0.0 
    1.6747        0.0    17.3105     7.0148 
       0.0     0.8373    22.2662     2.8965 
       0.0        0.0    17.3105     8.6895 
    3.9261     3.5416     5.1479    13.3845 
PPM
     A          C          G          T    
    0.2624     0.1188     0.3886     0.2302 
    0.0792     0.1584     0.4134      0.349 
       0.0     0.2698     0.6188     0.1114 
    0.0792        0.0     0.5718      0.349 
    0.0792     0.1114     0.4604      0.349 
    0.1584     0.0322     0.4282     0.3812 
       0.0     0.0322     0.7772     0.1906 
       0.0     0.1436     0.5074      0.349 
       0.0     0.0322     0.6658      0.302 
       0.0     0.0322     0.8886     0.0792 
       0.0     0.0966     0.5866     0.3168 
       0.0        0.0     0.0644     0.9356 
    0.0322        0.0     0.9356     0.0322 
    0.0792     0.0966     0.4752      0.349 
       0.0     0.0322     0.2376     0.7302 
    0.0644     0.0322     0.1584      0.745 
       0.0     0.0322     0.3168      0.651 
       0.0     0.0644     0.9356        0.0 
    0.0644        0.0     0.6658     0.2698 
       0.0     0.0322     0.8564     0.1114 
       0.0        0.0     0.6658     0.3342 
     0.151     0.1362      0.198     0.5148 
PWM uniform
     A          C          G          T    
    0.0432    -0.6281     0.4006     -0.073 
   -0.9343    -0.3939      0.458     0.3015 
    -2.195      0.068     0.8376    -0.6786 
   -0.9343     -2.195     0.7626     0.3015 
   -0.9343    -0.6786     0.5584     0.3015 
   -0.3939     -1.488     0.4907     0.3828 
    -2.195     -1.488     1.0557    -0.2372 
    -2.195    -0.4751     0.6497     0.3015 
    -2.195     -1.488     0.9074     0.1696 
    -2.195     -1.488     1.1848    -0.9343 
    -2.195    -0.7879     0.7868      0.213 
    -2.195     -2.195    -1.0779     1.2346 
    -1.488     -2.195     1.2346     -1.488 
   -0.9343    -0.7879      0.588     0.3015 
    -2.195     -1.488    -0.0451     0.9958 
   -1.0779     -1.488    -0.3939      1.015 
    -2.195     -1.488      0.213      0.886 
    -2.195    -1.0779     1.2346     -2.195 
   -1.0779     -2.195     0.9074      0.068 
    -2.195     -1.488     1.1491    -0.6786 
    -2.195     -2.195     0.9074     0.2618 
   -0.4337    -0.5183    -0.2044     0.6633 
PWM hg19
     A          C          G          T    
   -0.0938    -0.4805      0.571    -0.2078 
   -1.0426    -0.2389     0.6291     0.1605 
    -2.195     0.2335     1.0126    -0.7972 
   -1.0426     -2.195     0.9369     0.1605 
   -1.0426    -0.5329     0.7307     0.1605 
   -0.5214     -1.391     0.6622     0.2408 
    -2.195     -1.391     1.2322    -0.3685 
    -2.195    -0.3225     0.8229     0.1605 
    -2.195     -1.391     1.0829     0.0306 
    -2.195     -1.391     1.3621    -1.0426 
    -2.195    -0.6467     0.9614     0.0733 
    -2.195     -2.195    -0.9512     1.0853 
   -1.5634     -2.195     1.4122    -1.5634 
   -1.0426    -0.6467     0.7607     0.1605 
    -2.195     -1.391     0.1183      0.848 
   -1.1793     -1.391    -0.2389     0.8671 
    -2.195     -1.391     0.3809      0.739 
    -2.195    -0.9512     1.4122     -2.195 
   -1.1793     -2.195     1.0829    -0.0694 
    -2.195     -1.391     1.3263    -0.7972 
    -2.195     -2.195     1.0829     0.1214 
     -0.56     -0.367    -0.0445     0.5182