back RFX3_f1 HOCOMOCO-build9-MAR2012


UniProt RFX3
motif weight654.66289
total sequences927
data sources PARALLELSELEX:919
TRANSFAC20112:8
motif logo
consensusbGTTRCCATGGhRn
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   73.5546   198.6841   229.9855   152.4387 
       0.0        0.0   654.6629        0.0 
       0.0        0.0        0.0   654.6629 
   45.8193     5.8503        0.0   602.9932 
  218.0969     2.9252   399.7197    33.9211 
       0.0    583.854        0.0    70.8089 
       0.0   517.1487        0.0   137.5141 
  653.7745        0.0     0.4442     0.4442 
    4.4422        0.0    36.0925   614.1282 
   68.9653        0.0   585.6976        0.0 
    44.194     0.8884   609.5805        0.0 
   78.8421   182.7853    47.7931   345.2423 
  384.2331     0.4442   196.8913    73.0943 
  363.6443    96.1792    96.1792    98.6602 
PPM
     A          C          G          T    
    0.1124     0.3035     0.3513     0.2329 
       0.0        0.0        1.0        0.0 
       0.0        0.0        0.0        1.0 
      0.07     0.0089        0.0     0.9211 
    0.3331     0.0045     0.6106     0.0518 
       0.0     0.8918        0.0     0.1082 
       0.0     0.7899        0.0     0.2101 
    0.9986        0.0     0.0007     0.0007 
    0.0068        0.0     0.0551     0.9381 
    0.1053        0.0     0.8947        0.0 
    0.0675     0.0014     0.9311        0.0 
    0.1204     0.2792      0.073     0.5274 
    0.5869     0.0007     0.3008     0.1117 
    0.5555     0.1469     0.1469     0.1507 
PWM uniform
     A          C          G          T    
   -0.7879     0.1922     0.3374    -0.0703 
   -4.6246    -4.6246     1.3789    -4.6246 
   -4.6246    -4.6246    -4.6246     1.3789 
   -1.2482    -3.0966    -4.6246     1.2969 
    0.2847    -3.5934     0.8871     -1.537 
   -4.6246     1.2647    -4.6246    -0.8251 
   -4.6246     1.1438    -4.6246    -0.1722 
    1.3776    -4.6246    -4.3824    -4.3824 
   -3.3054    -4.6246    -1.4777     1.3152 
   -0.8508    -4.6246     1.2679    -4.6246 
   -1.2831    -4.1876     1.3077    -4.6246 
   -0.7199     0.1095    -1.2074     0.7412 
    0.8478    -4.3824     0.1832     -0.794 
    0.7929    -0.5248    -0.5248    -0.4997 
PWM hg19
     A          C          G          T    
   -0.9389     0.3738     0.5192    -0.2232 
   -4.6246    -4.6246     1.5615    -4.6246 
   -4.6246    -4.6246    -4.6246     1.2247 
   -1.3972    -2.9505    -4.6246     1.1427 
    0.1312    -3.4718     1.0695     -1.684 
   -4.6246     1.4473    -4.6246     -0.976 
   -4.6246     1.3263    -4.6246    -0.3249 
    1.2233    -4.6246    -4.3401    -4.4137 
   -3.4164    -4.6246    -1.3018     1.1609 
   -1.0017    -4.6246     1.4505    -4.6246 
   -1.4318    -4.1189     1.4903    -4.6246 
   -0.8712      0.291    -1.0299     0.5874 
    0.6938    -4.3401     0.3648     -0.945 
     0.639    -0.3445    -0.3445    -0.6517