| UniProt |
RFX1
|
| motif weight | 24.0 |
| total sequences | 24 |
| data sources |
TRANSFAC20112:24
|
| motif logo |
|
| consensus | GTTGCbWbGSRR |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
0.7186 0.7186 22.5629 0.0
1.7246 0.0 0.0 22.2754
0.0 0.0 1.8683 22.1317
2.8743 1.006 19.4012 0.7186
0.7186 23.2814 0.0 0.0
0.0 9.988 4.024 9.988
14.7665 2.0479 3.3413 3.8443
1.6168 4.6347 12.3952 5.3533
3.1257 0.8982 19.7964 0.1796
0.0 7.6886 11.9281 4.3832
13.5449 2.6946 6.503 1.2575
15.9162 2.5509 4.994 0.5389
|
| PPM | A C G T
0.0299 0.0299 0.9401 0.0
0.0719 0.0 0.0 0.9281
0.0 0.0 0.0778 0.9222
0.1198 0.0419 0.8084 0.0299
0.0299 0.9701 0.0 0.0
0.0 0.4162 0.1677 0.4162
0.6153 0.0853 0.1392 0.1602
0.0674 0.1931 0.5165 0.2231
0.1302 0.0374 0.8249 0.0075
0.0 0.3204 0.497 0.1826
0.5644 0.1123 0.271 0.0524
0.6632 0.1063 0.2081 0.0225
|
| PWM uniform | A C G T
-1.502 -1.502 1.2348 -2.1461
-0.9922 -2.1461 -2.1461 1.2224
-2.1461 -2.1461 -0.9367 1.2162
-0.6163 -1.3281 1.0894 -1.502
-1.502 1.2651 -2.1461 -2.1461
-2.1461 0.4618 -0.3437 0.4618
0.8287 -0.8715 -0.4964 -0.3817
-1.036 -0.2243 0.6633 -0.1
-0.55 -1.3898 1.1087 -1.9423
-2.1461 0.222 0.6273 -0.2717
0.7469 -0.6665 0.0714 -1.1973
0.8999 -0.7085 -0.1602 -1.6284
|
| PWM hg19 | A C G T
-1.5724 -1.4109 1.4121 -2.1461
-1.0955 -2.1461 -2.1461 1.0735
-2.1461 -2.1461 -0.8049 1.0673
-0.7353 -1.2217 1.2658 -1.5724
-1.5724 1.4426 -2.1461 -2.1461
-2.1461 0.6324 -0.1886 0.3194
0.6825 -0.7363 -0.3461 -0.5081
-1.137 -0.0661 0.8362 -0.2333
-0.6713 -1.2885 1.2853 -1.9691
-2.1461 0.3892 0.7998 -0.4011
0.6015 -0.5223 0.2361 -1.2892
0.7532 -0.566 -0.0004 -1.688
|
