back REST_f1 HOCOMOCO-build9-MAR2012


UniProt REST
motif weight8492.47693
total sequences8861
data sources HUDSONALPHACHIPSEQV2:7173
JASPAR:1607
TRANSFAC20112:81
motif logo
consensusdRShRCTGTCCdhGGTSCTGRh
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
 1682.6342  1215.2505  3264.0349  2330.5573 
 1204.4386   260.5103  5992.5997  1034.9284 
   785.569  1738.1786  5043.2751   925.4542 
 2461.8439  3900.1763   214.2272  1916.2295 
 1088.9716  1027.1167  5304.5966  1071.7919 
  151.5938  7790.5265   276.7272   273.6294 
  149.0441   146.0804    69.2854  8128.0671 
  340.6748  1157.1793  6847.9361   146.6867 
  298.3971   279.9186   658.6156  7255.5456 
    51.432  8152.3878    59.7418   228.9154 
   50.2334  8120.4985    50.2446   271.5004 
 4180.9148   786.4455  2286.3048  1238.8118 
 1679.2215   1158.108  1037.6609  4617.4866 
   374.657   140.8645  7818.4029   158.5525 
   86.7208   155.8963  8202.7458     47.114 
  102.5385    98.2183    86.4117  8205.3085 
  771.9777  1349.1438  5695.2558   676.0997 
   63.8934  8069.1271   186.7459   172.7106 
  170.3251   427.5771   172.8671  7721.7077 
  528.3936   250.4299  7349.8225    363.831 
 5996.2937   838.1151  1392.6928   265.3753 
 4667.7965  1886.8146   832.7393  1105.1266 
PPM
     A          C          G          T    
    0.1981     0.1431     0.3843     0.2744 
    0.1418     0.0307     0.7056     0.1219 
    0.0925     0.2047     0.5939      0.109 
    0.2899     0.4593     0.0252     0.2256 
    0.1282     0.1209     0.6246     0.1262 
    0.0179     0.9173     0.0326     0.0322 
    0.0176     0.0172     0.0082     0.9571 
    0.0401     0.1363     0.8064     0.0173 
    0.0351      0.033     0.0776     0.8543 
    0.0061       0.96      0.007      0.027 
    0.0059     0.9562     0.0059      0.032 
    0.4923     0.0926     0.2692     0.1459 
    0.1977     0.1364     0.1222     0.5437 
    0.0441     0.0166     0.9206     0.0187 
    0.0102     0.0184     0.9659     0.0055 
    0.0121     0.0116     0.0102     0.9662 
    0.0909     0.1589     0.6706     0.0796 
    0.0075     0.9502      0.022     0.0203 
    0.0201     0.0503     0.0204     0.9092 
    0.0622     0.0295     0.8655     0.0428 
    0.7061     0.0987      0.164     0.0312 
    0.5496     0.2222     0.0981     0.1301 
PWM uniform
     A          C          G          T    
   -0.2322    -0.5571     0.4297     0.0931 
   -0.5661    -2.0904      1.037    -0.7174 
   -0.9924    -0.1998     0.8646     -0.829 
    0.1479     0.6077    -2.2842    -0.1024 
   -0.6666     -0.725      0.915    -0.6825 
   -2.6257     1.2992    -2.0305    -2.0417 
   -2.6424    -2.6622    -3.3914     1.3417 
   -1.8242     -0.606     1.1703    -2.6581 
   -1.9557    -2.0192    -1.1681     1.2281 
   -3.6784     1.3446    -3.5345    -2.2185 
    -3.701     1.3407    -3.7008    -2.0494 
    0.6771    -0.9913      0.074     -0.538 
   -0.2343    -0.6052    -0.7148     0.7764 
   -1.7297     -2.698     1.3028    -2.5815 
   -3.1733    -2.5981     1.3508    -3.7622 
   -3.0097    -3.0517    -3.1767     1.3511 
   -1.0098    -0.4528     0.9861     -1.142 
   -3.4697     1.3344    -2.4199    -2.4971 
   -2.5108    -1.5983    -2.4962     1.2904 
   -1.3876    -2.1295      1.241    -1.7588 
    1.0376    -0.9279    -0.4211    -2.0721 
    0.7872    -0.1179    -0.9343    -0.6519 
PWM hg19
     A          C          G          T    
   -0.3867    -0.3744     0.6126    -0.0614 
   -0.7204    -1.9088     1.2199    -0.8717 
   -1.1466     -0.017     1.0475    -0.9832 
   -0.0066     0.7906    -2.1029    -0.2569 
    -0.821    -0.5423      1.098    -0.8368 
   -2.7779     1.4822    -1.8489     -2.195 
   -2.7946    -2.4817    -3.2136      1.187 
   -1.9777    -0.4233     1.3533    -2.8102 
   -2.1091    -1.8375    -0.9857     1.0735 
   -3.8261     1.5276    -3.3576    -2.3715 
   -3.8485     1.5237     -3.525    -2.2027 
    0.5225    -0.8088     0.2568    -0.6923 
   -0.3887    -0.4225    -0.5321     0.6218 
   -1.8833    -2.5176     1.4858    -2.7338 
   -3.3237    -2.4175     1.5338    -3.9093 
   -3.1607    -2.8725     -2.998     1.1965 
    -1.164    -0.2701      1.169    -1.2961 
   -3.6187     1.5174    -2.2389    -2.6496 
   -2.6633    -1.4161    -2.3153     1.1358 
   -1.5415     -1.948      1.424    -1.9124 
     0.883    -0.7453    -0.2383    -2.2253 
    0.6326      0.065    -0.7517    -0.8063