| UniProt |
RARG
|
| motif weight | 24.03017 |
| total sequences | 32 |
| data sources |
TRANSFAC20112:32
|
| motif logo |
|
| consensus | dddGbdbRvMnvRAGGTCAv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
4.9569 2.4784 12.3922 4.2026
5.0647 3.6638 11.3147 3.9871
7.8664 0.9698 11.3147 3.8793
0.0 0.9698 18.5345 4.5259
1.0776 4.6336 10.4526 7.8664
5.4957 1.9397 4.9569 11.6379
2.694 13.0388 4.7414 3.556
12.7155 3.0172 7.2198 1.0776
5.2802 8.0819 7.8664 2.8017
4.0948 15.3017 2.694 1.9397
5.6034 7.5431 7.0043 3.8793
11.8534 3.125 6.4655 2.5862
8.7284 5.9267 9.375 0.0
20.1509 0.0 3.0172 0.8621
0.0 0.0 24.0302 0.0
0.0 0.0 16.9181 7.1121
4.4181 0.0 0.0 19.6121
2.0474 20.3664 1.6164 0.0
22.9526 1.0776 0.0 0.0
6.8157 8.2166 7.7856 1.2123
|
| PPM | A C G T
0.2063 0.1031 0.5157 0.1749
0.2108 0.1525 0.4709 0.1659
0.3274 0.0404 0.4709 0.1614
0.0 0.0404 0.7713 0.1883
0.0448 0.1928 0.435 0.3274
0.2287 0.0807 0.2063 0.4843
0.1121 0.5426 0.1973 0.148
0.5291 0.1256 0.3004 0.0448
0.2197 0.3363 0.3274 0.1166
0.1704 0.6368 0.1121 0.0807
0.2332 0.3139 0.2915 0.1614
0.4933 0.13 0.2691 0.1076
0.3632 0.2466 0.3901 0.0
0.8386 0.0 0.1256 0.0359
0.0 0.0 1.0 0.0
0.0 0.0 0.704 0.296
0.1839 0.0 0.0 0.8161
0.0852 0.8475 0.0673 0.0
0.9552 0.0448 0.0 0.0
0.2836 0.3419 0.324 0.0504
|
| PWM uniform | A C G T
-0.1678 -0.7315 0.662 -0.3084
-0.1492 -0.4224 0.5767 -0.3524
0.2416 -1.3493 0.5767 -0.3752
-2.1469 -1.3493 1.0444 -0.2457
-1.29 -0.2256 0.5029 0.2416
-0.0782 -0.9113 -0.1678 0.6031
-0.6677 0.7098 -0.206 -0.4469
0.6862 -0.5791 0.164 -1.29
-0.1131 0.2662 0.2416 -0.6373
-0.3301 0.8613 -0.6677 -0.9113
-0.0612 0.2035 0.1367 -0.3752
0.6202 -0.5512 0.0652 -0.6991
0.3365 -0.012 0.4022 -2.1469
1.1247 -2.1469 -0.5791 -1.4123
-2.1469 -2.1469 1.2946 -2.1469
-2.1469 -2.1469 0.957 0.1505
-0.2661 -2.1469 -2.1469 1.0986
-0.8727 1.1349 -1.0371 -2.1469
1.2502 -1.29 -2.1469 -2.1469
0.1123 0.2812 0.2322 -1.2206
|
| PWM hg19 | A C G T
-0.2996 -0.5899 0.8349 -0.4368
-0.2814 -0.2697 0.7487 -0.4797
0.1022 -1.2446 0.7487 -0.5018
-2.1469 -1.2446 1.2205 -0.3756
-1.3761 -0.0674 0.674 0.1022
-0.212 -0.7781 -0.0081 0.459
-0.785 0.8832 -0.0472 -0.5715
0.5413 -0.4316 0.3303 -1.3761
-0.2461 0.4341 0.4092 -0.7557
-0.458 1.0361 -0.5235 -1.0185
-0.1953 0.3705 0.3026 -0.5018
0.476 -0.4027 0.2297 -0.8152
0.1957 0.1511 0.572 -2.1469
0.9763 -2.1469 -0.4316 -1.4898
-2.1469 -2.1469 1.4722 -2.1469
-2.1469 -2.1469 1.1325 0.0125
-0.3956 -2.1469 -2.1469 0.9504
-0.9816 1.3116 -0.9108 -2.1469
1.1011 -1.1807 -2.1469 -2.1469
-0.0251 0.4494 0.3996 -1.3111
|
