| UniProt |
RARB
|
| motif weight | 21.26656 |
| total sequences | 35 |
| data sources |
TRANSFAC20112:35
|
| motif logo |
|
| consensus | vAGGTCAnvRv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
3.8245 6.7219 9.9089 0.8113
17.4421 0.0 3.8245 0.0
0.0 0.0 21.2666 0.0
0.0 0.0 20.2235 1.043
0.0 0.0 0.0 21.2666
0.0 21.2666 0.0 0.0
21.2666 0.0 0.0 0.0
4.7517 4.2881 8.4023 3.8245
6.7219 4.2881 8.0546 2.202
6.9536 5.3311 8.9818 0.0
5.3601 6.9826 6.8088 2.1151
|
| PPM | A C G T
0.1798 0.3161 0.4659 0.0381
0.8202 0.0 0.1798 0.0
0.0 0.0 1.0 0.0
0.0 0.0 0.951 0.049
0.0 0.0 0.0 1.0
0.0 1.0 0.0 0.0
1.0 0.0 0.0 0.0
0.2234 0.2016 0.3951 0.1798
0.3161 0.2016 0.3787 0.1035
0.327 0.2507 0.4223 0.0
0.252 0.3283 0.3202 0.0995
|
| PWM uniform | A C G T
-0.2815 0.2079 0.5626 -1.3506
1.0966 -2.074 -0.2815 -2.074
-2.074 -2.074 1.2873 -2.074
-2.074 -2.074 1.2388 -1.2133
-2.074 -2.074 -2.074 1.2873
-2.074 1.2873 -2.074 -2.074
1.2873 -2.074 -2.074 -2.074
-0.0975 -0.1853 0.4104 -0.2815
0.2079 -0.1853 0.3717 -0.7179
0.2384 0.0024 0.4717 -2.074
0.0071 0.2421 0.2194 -0.7476
|
| PWM hg19 | A C G T
-0.4087 0.3737 0.7336 -1.4272
0.9489 -2.074 -0.1268 -2.074
-2.074 -2.074 1.4645 -2.074
-2.074 -2.074 1.4157 -1.2996
-2.074 -2.074 -2.074 1.1384
-2.074 1.4645 -2.074 -2.074
1.1384 -2.074 -2.074 -2.074
-0.2293 -0.0279 0.5794 -0.4087
0.0702 -0.0279 0.5402 -0.8303
0.1002 0.1642 0.6415 -2.074
-0.1269 0.4085 0.3855 -0.8588
|
