back RARA_f2 HOCOMOCO-build9-MAR2012

UniProt	RARA
motif weight	121.0
total sequences	130
data sources	JASPAR:23 TRANSFAC20112:107
motif logo
consensus	RGKTSAnvvdvRSKKSR
small-BiSMark	hg19 PWM
small-BiSMark	uniform PWM
thresholds	hg19 PWM
thresholds	uniform PWM
WPCM	A C G T 67.7808 1.9706 46.5946 4.654 0.0 0.4193 119.0713 1.5094 5.9244 3.522 77.6045 33.9491 5.7022 0.8386 9.9495 104.5097 0.7547 88.7783 21.9661 9.5009 106.1868 0.0 13.3038 1.5094 27.4712 36.9428 26.0163 30.5697 20.985 46.1376 39.7351 14.1423 33.5634 23.0269 48.2298 16.18 53.6217 12.2136 38.7037 16.4609 29.7898 30.2636 52.2255 8.721 71.7849 15.9284 21.7984 11.4883 8.7755 13.5553 93.8348 4.8343 12.0753 6.5953 73.1559 29.1735 16.8802 13.2199 17.6056 73.2943 11.8992 84.2166 16.201 8.6833 87.7259 10.1047 13.8488 9.3206
PPM	A C G T 0.5602 0.0163 0.3851 0.0385 0.0 0.0035 0.9841 0.0125 0.049 0.0291 0.6414 0.2806 0.0471 0.0069 0.0822 0.8637 0.0062 0.7337 0.1815 0.0785 0.8776 0.0 0.1099 0.0125 0.227 0.3053 0.215 0.2526 0.1734 0.3813 0.3284 0.1169 0.2774 0.1903 0.3986 0.1337 0.4432 0.1009 0.3199 0.136 0.2462 0.2501 0.4316 0.0721 0.5933 0.1316 0.1802 0.0949 0.0725 0.112 0.7755 0.04 0.0998 0.0545 0.6046 0.2411 0.1395 0.1093 0.1455 0.6057 0.0983 0.696 0.1339 0.0718 0.725 0.0835 0.1145 0.077
PWM uniform	A C G T 0.7854 -2.2948 0.4185 -1.6814 -3.2669 -2.967 1.3414 -2.452 -1.485 -1.8964 0.9186 0.1112 -1.5167 -2.7366 -1.0371 1.2123 -2.7787 1.0512 -0.3057 -1.0781 1.2281 -3.2669 -0.774 -2.452 -0.0925 0.1929 -0.1446 0.0101 -0.349 0.4089 0.2636 -0.7178 0.1002 -0.2609 0.4522 -0.5931 0.5557 -0.8522 0.2381 -0.5771 -0.0147 0.0004 0.5299 -1.1538 0.8419 -0.6077 -0.313 -0.9078 -1.1483 -0.7568 1.1059 -1.6511 -0.8625 -1.395 0.8605 -0.0348 -0.5536 -0.7798 -0.5143 0.8623 -0.8759 0.9992 -0.5919 -1.1576 1.0394 -1.0232 -0.7371 -1.0951
PWM hg19	A C G T 0.6337 -2.1771 0.5974 -1.8024 -3.2669 -2.9163 1.5227 -2.5353 -1.6119 -1.7567 1.0991 -0.0378 -1.6427 -2.6572 -0.8722 1.0596 -2.8356 1.232 -0.1314 -1.2142 1.0753 -3.2669 -0.6049 -2.5353 -0.2402 0.3707 0.0311 -0.1383 -0.4947 0.5877 0.4417 -0.8595 -0.0487 -0.0862 0.6311 -0.7363 0.4047 -0.6842 0.4161 -0.7204 -0.1629 0.1771 0.7092 -1.2885 0.69 -0.4364 -0.1387 -1.0467 -1.2831 -0.5875 1.2868 -1.773 -1.0022 -1.238 1.0408 -0.1829 -0.6972 -0.6108 -0.342 0.7104 -1.0154 1.1798 -0.4205 -1.2922 0.887 -0.8581 -0.5675 -1.2309