back PLAG1_si HOCOMOCO-build9-MAR2012


UniProt PLAG1
motif weight25.0
total sequences25
data sources TRANSFAC20112:25
motif logo
consensusRvdRGGGGSnnbv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
      17.0        1.0        5.0        2.0 
       7.0        5.0       12.0        1.0 
       9.0        1.0        8.0        7.0 
       6.0        0.0       16.0        3.0 
       2.0        2.0       20.0        1.0 
       4.0        0.0       21.0        0.0 
       0.0        0.0       25.0        0.0 
       0.0        0.0       25.0        0.0 
       1.0       14.0       10.0        0.0 
       6.0        9.0        1.0        9.0 
       1.0       10.0        7.0        7.0 
       3.0        6.0        5.0       11.0 
      12.0        6.0        4.0        3.0 
PPM
     A          C          G          T    
      0.68       0.04        0.2       0.08 
      0.28        0.2       0.48       0.04 
      0.36       0.04       0.32       0.28 
      0.24        0.0       0.64       0.12 
      0.08       0.08        0.8       0.04 
      0.16        0.0       0.84        0.0 
       0.0        0.0        1.0        0.0 
       0.0        0.0        1.0        0.0 
      0.04       0.56        0.4        0.0 
      0.24       0.36       0.04       0.36 
      0.04        0.4       0.28       0.28 
      0.12       0.24        0.2       0.44 
      0.48       0.24       0.16       0.12 
PWM uniform
     A          C          G          T    
    0.9258    -1.3633     -0.195    -0.9224 
     0.101     -0.195     0.5961    -1.3633 
    0.3292    -1.3633     0.2216      0.101 
   -0.0361     -2.171      0.868    -0.6175 
   -0.9224    -0.9224     1.0815    -1.3633 
   -0.3841     -2.171     1.1284     -2.171 
    -2.171     -2.171     1.2969     -2.171 
    -2.171     -2.171     1.2969     -2.171 
   -1.3633     0.7412     0.4263     -2.171 
   -0.0361     0.3292    -1.3633     0.3292 
   -1.3633     0.4263      0.101      0.101 
   -0.6175    -0.0361     -0.195     0.5148 
    0.5961    -0.0361    -0.3841    -0.6175 
PWM hg19
     A          C          G          T    
    0.7786    -1.2578    -0.0355    -1.0302 
   -0.0365    -0.0355     0.7686     -1.446 
    0.1881    -1.2578     0.3892    -0.0365 
   -0.1712     -2.171      1.043    -0.7373 
   -1.0302    -0.7885      1.258     -1.446 
   -0.5111     -2.171     1.3053     -2.171 
    -2.171     -2.171     1.4747     -2.171 
    -2.171     -2.171     1.4747     -2.171 
    -1.446     0.9152     0.5968     -2.171 
   -0.1712     0.4984    -1.2578     0.1881 
    -1.446     0.5968     0.2667    -0.0365 
   -0.7373      0.127    -0.0355     0.3715 
    0.4519      0.127    -0.2295    -0.7373