| UniProt |
PLAG1
|
| motif weight | 25.0 |
| total sequences | 25 |
| data sources |
TRANSFAC20112:25
|
| motif logo |
|
| consensus | RvdRGGGGSnnbv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
17.0 1.0 5.0 2.0
7.0 5.0 12.0 1.0
9.0 1.0 8.0 7.0
6.0 0.0 16.0 3.0
2.0 2.0 20.0 1.0
4.0 0.0 21.0 0.0
0.0 0.0 25.0 0.0
0.0 0.0 25.0 0.0
1.0 14.0 10.0 0.0
6.0 9.0 1.0 9.0
1.0 10.0 7.0 7.0
3.0 6.0 5.0 11.0
12.0 6.0 4.0 3.0
|
| PPM | A C G T
0.68 0.04 0.2 0.08
0.28 0.2 0.48 0.04
0.36 0.04 0.32 0.28
0.24 0.0 0.64 0.12
0.08 0.08 0.8 0.04
0.16 0.0 0.84 0.0
0.0 0.0 1.0 0.0
0.0 0.0 1.0 0.0
0.04 0.56 0.4 0.0
0.24 0.36 0.04 0.36
0.04 0.4 0.28 0.28
0.12 0.24 0.2 0.44
0.48 0.24 0.16 0.12
|
| PWM uniform | A C G T
0.9258 -1.3633 -0.195 -0.9224
0.101 -0.195 0.5961 -1.3633
0.3292 -1.3633 0.2216 0.101
-0.0361 -2.171 0.868 -0.6175
-0.9224 -0.9224 1.0815 -1.3633
-0.3841 -2.171 1.1284 -2.171
-2.171 -2.171 1.2969 -2.171
-2.171 -2.171 1.2969 -2.171
-1.3633 0.7412 0.4263 -2.171
-0.0361 0.3292 -1.3633 0.3292
-1.3633 0.4263 0.101 0.101
-0.6175 -0.0361 -0.195 0.5148
0.5961 -0.0361 -0.3841 -0.6175
|
| PWM hg19 | A C G T
0.7786 -1.2578 -0.0355 -1.0302
-0.0365 -0.0355 0.7686 -1.446
0.1881 -1.2578 0.3892 -0.0365
-0.1712 -2.171 1.043 -0.7373
-1.0302 -0.7885 1.258 -1.446
-0.5111 -2.171 1.3053 -2.171
-2.171 -2.171 1.4747 -2.171
-2.171 -2.171 1.4747 -2.171
-1.446 0.9152 0.5968 -2.171
-0.1712 0.4984 -1.2578 0.1881
-1.446 0.5968 0.2667 -0.0365
-0.7373 0.127 -0.0355 0.3715
0.4519 0.127 -0.2295 -0.7373
|
