| UniProt |
PLAG1
|
| motif weight | 25.0 |
| total sequences | 25 |
| data sources |
TRANSFAC20112:25
|
| motif logo |
|
| consensus | RGGGGSMhndRdMGGGK |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
5.5 0.5 16.5 2.5
5.0 0.0 20.0 0.0
10.0 0.0 15.0 0.0
0.0 0.0 25.0 0.0
0.0 8.0 17.0 0.0
1.0 14.0 7.0 3.0
13.0 9.0 2.0 1.0
5.0 8.0 3.0 9.0
5.0 8.0 6.0 6.0
11.0 2.0 5.0 7.0
8.0 6.0 11.0 0.0
4.0 2.0 12.0 7.0
17.0 4.0 3.0 1.0
2.0 0.0 20.0 3.0
1.0 0.0 24.0 0.0
0.0 0.0 25.0 0.0
2.0 1.0 17.0 5.0
|
| PPM | A C G T
0.22 0.02 0.66 0.1
0.2 0.0 0.8 0.0
0.4 0.0 0.6 0.0
0.0 0.0 1.0 0.0
0.0 0.32 0.68 0.0
0.04 0.56 0.28 0.12
0.52 0.36 0.08 0.04
0.2 0.32 0.12 0.36
0.2 0.32 0.24 0.24
0.44 0.08 0.2 0.28
0.32 0.24 0.44 0.0
0.16 0.08 0.48 0.28
0.68 0.16 0.12 0.04
0.08 0.0 0.8 0.12
0.04 0.0 0.96 0.0
0.0 0.0 1.0 0.0
0.08 0.04 0.68 0.2
|
| PWM uniform | A C G T
-0.1124 -1.6877 0.8973 -0.7583
-0.195 -2.171 1.0815 -2.171
0.4263 -2.171 0.8066 -2.171
-2.171 -2.171 1.2969 -2.171
-2.171 0.2216 0.9258 -2.171
-1.3633 0.7412 0.101 -0.6175
0.6713 0.3292 -0.9224 -1.3633
-0.195 0.2216 -0.6175 0.3292
-0.195 0.2216 -0.0361 -0.0361
0.5148 -0.9224 -0.195 0.101
0.2216 -0.0361 0.5148 -2.171
-0.3841 -0.9224 0.5961 0.101
0.9258 -0.3841 -0.6175 -1.3633
-0.9224 -2.171 1.0815 -0.6175
-1.3633 -2.171 1.2573 -2.171
-2.171 -2.171 1.2969 -2.171
-0.9224 -1.3633 0.9258 -0.195
|
| PWM hg19 | A C G T
-0.2459 -1.6136 1.0725 -0.8731
-0.3268 -2.171 1.258 -2.171
0.284 -2.171 0.9811 -2.171
-2.171 -2.171 1.4747 -2.171
-2.171 0.3892 1.1012 -2.171
-1.446 0.9152 0.2667 -0.7373
0.5264 0.4984 -0.7885 -1.446
-0.3268 0.3892 -0.4704 0.1881
-0.3268 0.3892 0.127 -0.1712
0.3715 -0.7885 -0.0355 -0.0365
0.0821 0.127 0.6864 -2.171
-0.5111 -0.7885 0.7686 -0.0365
0.7786 -0.2295 -0.4704 -1.446
-1.0302 -2.171 1.258 -0.7373
-1.446 -2.171 1.4349 -2.171
-2.171 -2.171 1.4747 -2.171
-1.0302 -1.2578 1.1012 -0.3268
|
