back PITX2_si HOCOMOCO-build9-MAR2012


UniProt PITX2
motif weight17.0
total sequences20
data sources TRANSFAC20112:20
motif logo
consensusYKGGATTWvh
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    0.9503     4.0124     2.9565     9.0807 
    1.9006     0.9503     8.0248     6.1242 
    2.0062        0.0    14.0435     0.9503 
       0.0        0.0       17.0        0.0 
   14.0435     2.9565        0.0        0.0 
       0.0        0.0        0.0       17.0 
       0.0        0.0     0.9503    16.0497 
   11.9317     0.9503        0.0      4.118 
    6.9689     5.1739     3.8012     1.0559 
    6.1506     3.2997     2.1382     5.4115 
PPM
     A          C          G          T    
    0.0559      0.236     0.1739     0.5342 
    0.1118     0.0559      0.472     0.3602 
     0.118        0.0     0.8261     0.0559 
       0.0        0.0        1.0        0.0 
    0.8261     0.1739        0.0        0.0 
       0.0        0.0        0.0        1.0 
       0.0        0.0     0.0559     0.9441 
    0.7019     0.0559        0.0     0.2422 
    0.4099     0.3043     0.2236     0.0621 
    0.3618     0.1941     0.1258     0.3183 
PWM uniform
     A          C          G          T    
   -1.0951    -0.0491    -0.3023     0.6802 
   -0.6421    -1.0951     0.5661     0.3206 
   -0.6025    -1.9459     1.0903    -1.0951 
   -1.9459    -1.9459      1.273    -1.9459 
    1.0903    -0.3023    -1.9459    -1.9459 
   -1.9459    -1.9459    -1.9459      1.273 
   -1.9459    -1.9459    -1.0951     1.2178 
    0.9358    -1.0951    -1.9459     -0.027 
    0.4372     0.1709    -0.0949    -1.0334 
    0.3245    -0.2128     -0.555     0.2105 
PWM hg19
     A          C          G          T    
   -1.1807     0.1085    -0.1521     0.5376 
   -0.7524    -0.9862     0.7354     0.1832 
   -0.7144    -1.9459     1.2653    -1.1807 
   -1.9459    -1.9459     1.4493    -1.9459 
    0.9436    -0.1521    -1.9459    -1.9459 
   -1.9459    -1.9459    -1.9459      1.125 
   -1.9459    -1.9459    -0.9862     1.0702 
    0.7905    -0.9862    -1.9459    -0.1574 
    0.2979     0.3336     0.0615     -1.123 
     0.187    -0.0597    -0.4144      0.075