back PAX6_f1 HOCOMOCO-build9-MAR2012


UniProt PAX6
motif weight165.0
total sequences165
data sources JASPAR:43
TRANSFAC20112:122
motif logo
consensusTSAdGYGTRAM
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    4.1678    25.8358     6.1524    128.844 
    8.8935    88.9325    62.8056     4.3685 
  151.0016        0.0    12.6489     1.3496 
   74.3541    10.1041    16.0801    64.4617 
    5.2615    35.9355   123.0091     0.7939 
   10.6003   124.5858     7.7027    22.1112 
   29.6861     4.4456   130.8683        0.0 
    4.5647     3.4533    22.9073   134.0747 
   60.7614     0.6351    92.5424    11.0612 
  146.1237     2.7785      6.986     9.1118 
  119.9505    22.2965     9.9872    12.7657 
PPM
     A          C          G          T    
    0.0253     0.1566     0.0373     0.7809 
    0.0539      0.539     0.3806     0.0265 
    0.9152        0.0     0.0767     0.0082 
    0.4506     0.0612     0.0975     0.3907 
    0.0319     0.2178     0.7455     0.0048 
    0.0642     0.7551     0.0467      0.134 
    0.1799     0.0269     0.7931        0.0 
    0.0277     0.0209     0.1388     0.8126 
    0.3683     0.0038     0.5609      0.067 
    0.8856     0.0168     0.0423     0.0552 
     0.727     0.1351     0.0605     0.0774 
PWM uniform
     A          C          G          T    
   -2.0556    -0.4501    -1.7447     1.1183 
   -1.4307      0.752       0.41    -2.0194 
    1.2756     -3.506    -1.1164    -2.7846 
    0.5757    -1.3182    -0.8962     0.4356 
   -1.8725    -0.1335     1.0725    -3.0224 
   -1.2755     1.0851    -1.5552    -0.5979 
   -0.3173    -2.0058     1.1338     -3.506 
   -1.9852    -2.1962    -0.5644     1.1577 
    0.3776    -3.1022     0.7912    -1.2375 
     1.243    -2.3502    -1.6384    -1.4095 
    1.0475      -0.59    -1.3285    -1.1081 
PWM hg19
     A          C          G          T    
   -2.1718     -0.275    -1.5909     0.9653 
   -1.5646     0.9327     0.5897    -2.1369 
    1.1223     -3.506    -0.9488    -2.8611 
    0.4239    -1.1541    -0.7255     0.2841 
    -1.995     0.0438     1.2538    -3.0789 
   -1.4124     1.2664    -1.3963    -0.7435 
   -0.4651    -1.8608     1.3152     -3.506 
    -2.104    -2.0594    -0.3903     1.0047 
    0.2264    -3.0376      0.972     -1.375 
    1.0898    -2.2212    -1.4815    -1.5438 
    0.8946    -0.4161    -1.1646    -1.2476