back PAX5_si HOCOMOCO-build9-MAR2012


UniProt PAX5
motif weight3155.7874
total sequences4057
data sources HUDSONALPHACHIPSEQV2:2000,2000
JASPAR:12
TRANSFAC20112:45
motif logo
consensusRSCTGAGb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
  781.8984   327.1443  2020.5911    26.1536 
  511.9252    631.889  2011.9732        0.0 
   21.9851  2958.4479    20.8455   154.5089 
       0.0        0.0   130.7774    3025.01 
       0.0        0.0  3155.7874        0.0 
 3143.2339    12.5535        0.0        0.0 
  597.1466    34.6722  2523.9686        0.0 
  426.9209   783.2193  1369.0379   576.6092
PPM
     A          C          G          T    
    0.2478     0.1037     0.6403     0.0083 
    0.1622     0.2002     0.6376        0.0 
     0.007     0.9375     0.0066      0.049 
       0.0        0.0     0.0414     0.9586 
       0.0        0.0        1.0        0.0 
     0.996      0.004        0.0        0.0 
    0.1892      0.011     0.7998        0.0 
    0.1353     0.2482     0.4338     0.1827
PWM uniform
     A          C          G          T    
    -0.009    -0.8767     0.9389    -3.3351 
   -0.4311    -0.2214     0.9346     -5.973 
   -3.4952     1.3199    -3.5439      -1.62 
    -5.973     -5.973    -1.7845     1.3421 
    -5.973     -5.973     1.3844     -5.973 
    1.3804    -3.9944     -5.973     -5.973 
   -0.2777    -3.0708     1.1611     -5.973 
   -0.6119    -0.0073     0.5501    -0.3126
PWM hg19
     A          C          G          T    
   -0.1632    -0.6947     1.1218    -3.4778 
   -0.5851    -0.0388     1.1175     -5.973 
   -3.6359     1.5028    -3.3757    -1.7726 
    -5.973     -5.973     -1.604     1.1875 
    -5.973     -5.973     1.5673     -5.973 
    1.2258    -3.8348     -5.973     -5.973 
   -0.4318     -2.897      1.344     -5.973 
   -0.7658     0.1753     0.7329    -0.4667