back PAX5_f1 HOCOMOCO-build9-MAR2012

UniProt	PAX5
motif weight	3939.2166
total sequences	4057
data sources	HUDSONALPHACHIPSEQV2:2000,2000 JASPAR:12 TRANSFAC20112:45
motif logo
consensus	vdRnbYMvYvRRGYRKRRM
small-BiSMark	hg19 PWM
small-BiSMark	uniform PWM
thresholds	hg19 PWM
thresholds	uniform PWM
WPCM	A C G T 1083.9254 999.6525 1490.0699 365.5688 1337.6483 265.3706 1177.5783 1158.6195 1183.9727 202.9055 2476.6337 75.7047 1040.4103 684.9906 1356.3194 857.4964 155.2425 891.3724 1998.9449 893.6568 295.2843 3024.3123 120.4042 499.2159 2924.4939 380.0716 290.6492 344.0019 683.2373 1253.8962 1674.3033 327.7798 22.9983 1616.6602 410.1641 1889.394 601.4016 1439.2738 1743.6515 154.8898 2525.1236 17.6665 1312.7497 83.6768 2093.4869 76.6481 993.2379 775.8437 1.5959 862.048 3075.5726 0.0 162.3979 2959.9474 244.5428 572.3286 1320.9221 199.2972 2219.4686 199.5287 458.1193 172.031 1171.3667 2137.6996 1296.8192 182.6878 2459.1874 0.5222 2256.9161 235.1227 1173.886 273.2917 712.5533 2787.9836 353.5417 85.138
PPM	A C G T 0.2752 0.2538 0.3783 0.0928 0.3396 0.0674 0.2989 0.2941 0.3006 0.0515 0.6287 0.0192 0.2641 0.1739 0.3443 0.2177 0.0394 0.2263 0.5074 0.2269 0.075 0.7677 0.0306 0.1267 0.7424 0.0965 0.0738 0.0873 0.1734 0.3183 0.425 0.0832 0.0058 0.4104 0.1041 0.4796 0.1527 0.3654 0.4426 0.0393 0.641 0.0045 0.3333 0.0212 0.5314 0.0195 0.2521 0.197 0.0004 0.2188 0.7808 0.0 0.0412 0.7514 0.0621 0.1453 0.3353 0.0506 0.5634 0.0507 0.1163 0.0437 0.2974 0.5427 0.3292 0.0464 0.6243 0.0001 0.5729 0.0597 0.298 0.0694 0.1809 0.7078 0.0897 0.0216
PWM uniform	A C G T 0.0957 0.0149 0.4134 -0.9874 0.3057 -1.3056 0.1784 0.1622 0.1838 -1.5717 0.9209 -2.5407 0.0548 -0.3621 0.3195 -0.1381 -1.8363 -0.0995 0.7069 -0.0969 -1.1996 1.1206 -2.0866 -0.6774 1.087 -0.9488 -1.2153 -1.0479 -0.3647 0.2411 0.5298 -1.0959 -3.673 0.4949 -0.873 0.6506 -0.4918 0.3788 0.5704 -1.8386 0.9403 -3.9121 0.2869 -2.4431 0.753 -2.5287 0.0085 -0.2379 -5.5955 -0.1328 1.1374 -6.1671 -1.7918 1.0991 -1.3867 -0.5412 0.2931 -1.5894 0.8114 -1.5883 -0.7629 -1.7349 0.1731 0.7739 0.2747 -1.6755 0.9139 -5.9422 0.8281 -1.4257 0.1753 -1.2765 -0.3228 1.0393 -1.0207 -2.4263
PWM hg19	A C G T -0.0586 0.1976 0.5962 -1.1412 0.1513 -1.1239 0.3612 0.0079 0.0295 -1.3903 1.1038 -2.691 -0.0995 -0.1796 0.5023 -0.2924 -1.9888 0.0832 0.8897 -0.2512 -1.3531 1.3035 -1.9064 -0.8313 0.9325 -0.7666 -1.0335 -1.2016 -0.5188 0.4239 0.7127 -1.2495 -3.8139 0.6777 -0.6908 0.4961 -0.6459 0.5616 0.7532 -1.991 0.7858 -3.7467 0.4697 -2.5938 0.5985 -2.35 0.1912 -0.3921 -5.66 0.0498 1.3203 -6.1671 -1.9444 1.282 -1.2051 -0.6953 0.1387 -1.4081 0.9943 -1.7412 -0.9168 -1.5539 0.3559 0.6194 0.1203 -1.4943 1.0968 -5.9714 0.6736 -1.2441 0.358 -1.4299 -0.477 1.2222 -0.8386 -2.5769