back PAX2_si HOCOMOCO-build9-MAR2012


UniProt PAX2
motif weight58.43874
total sequences78
data sources JASPAR:31
TRANSFAC20112:47
motif logo
consensusSCRTGAM
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    7.8401    20.3063    29.4473     0.8449 
   22.1742    36.2645        0.0        0.0 
   29.3838     3.8798     25.056     0.1191 
       0.0     4.0919        0.0    54.3469 
       0.0        0.0    58.4387        0.0 
   52.4415     0.9527     2.0459     2.9986 
    6.8784    44.4675     1.0718      6.021
PPM
     A          C          G          T    
    0.1342     0.3475     0.5039     0.0145 
    0.3794     0.6206        0.0        0.0 
    0.5028     0.0664     0.4288      0.002 
       0.0       0.07        0.0       0.93 
       0.0        0.0        1.0        0.0 
    0.8974     0.0163      0.035     0.0513 
    0.1177     0.7609     0.0183      0.103
PWM uniform
     A          C          G          T    
   -0.5678     0.3108     0.6676    -2.1274 
    0.3948     0.8695    -2.7321    -2.7321 
    0.6655    -1.1604     0.5119    -2.6214 
   -2.7321     -1.118    -2.7321     1.2649 
   -2.7321    -2.7321     1.3363    -2.7321 
    1.2299    -2.0711    -1.6296    -1.3588 
   -0.6827     1.0684    -2.0124    -0.7977
PWM hg19
     A          C          G          T    
   -0.7034     0.4858      0.845    -2.1946 
    0.2474      1.048    -2.7321    -2.7321 
    0.5164    -1.0127     0.6884    -2.6365 
   -2.7321    -0.9688    -2.7321     1.1134 
   -2.7321    -2.7321     1.5164    -2.7321 
    1.0784    -1.9784    -1.5037     -1.472 
    -0.816     1.2477    -1.9143    -0.9284