back PAX2_f1 HOCOMOCO-build9-MAR2012

UniProt	PAX2
motif weight	50.22871
total sequences	78
data sources	JASPAR:31 TRANSFAC20112:47
motif logo
consensus	vhbnvdTSAhRvdYGAYW
small-BiSMark	hg19 PWM
small-BiSMark	uniform PWM
thresholds	hg19 PWM
thresholds	uniform PWM
WPCM	A C G T 11.6136 9.1819 20.6989 8.7343 16.6785 13.7993 2.8793 16.8717 2.8793 7.8653 12.6581 26.826 8.9098 23.2272 9.1819 8.9098 27.5196 8.0408 10.0509 4.6174 9.7789 8.7343 22.8057 8.9098 0.0 7.7687 0.9656 41.4944 4.0204 29.3367 14.8615 2.0102 41.3189 2.0102 6.8996 0.0 7.5932 12.9302 4.714 24.9913 10.92 2.9758 29.4332 6.8996 13.2023 26.1064 6.0306 4.8894 9.8755 4.6174 25.6849 10.0509 2.8793 12.0611 0.0 35.2883 4.0204 4.8894 41.3189 0.0 39.2121 0.0 2.0102 9.0064 3.4763 30.6709 0.0 16.0815 25.8627 2.0914 7.2529 15.0216
PPM	A C G T 0.2312 0.1828 0.4121 0.1739 0.3321 0.2747 0.0573 0.3359 0.0573 0.1566 0.252 0.5341 0.1774 0.4624 0.1828 0.1774 0.5479 0.1601 0.2001 0.0919 0.1947 0.1739 0.454 0.1774 0.0 0.1547 0.0192 0.8261 0.08 0.5841 0.2959 0.04 0.8226 0.04 0.1374 0.0 0.1512 0.2574 0.0938 0.4976 0.2174 0.0592 0.586 0.1374 0.2628 0.5198 0.1201 0.0973 0.1966 0.0919 0.5114 0.2001 0.0573 0.2401 0.0 0.7026 0.08 0.0973 0.8226 0.0 0.7807 0.0 0.04 0.1793 0.0692 0.6106 0.0 0.3202 0.5149 0.0416 0.1444 0.2991
PWM uniform	A C G T -0.0723 -0.2868 0.4709 -0.3319 0.2658 0.0878 -1.2551 0.2767 -1.2551 -0.4256 0.0074 0.7198 -0.314 0.5812 -0.2868 -0.314 0.7445 -0.4059 -0.2047 -0.8832 -0.2297 -0.3319 0.5637 -0.314 -2.6265 -0.4366 -1.9402 1.1435 -0.996 0.8063 0.1572 -1.5103 1.1394 -1.5103 -0.5412 -2.6265 -0.4568 0.0272 -0.8661 0.6516 -0.1289 -1.2304 0.8095 -0.5412 0.0466 0.6936 -0.6581 -0.8358 -0.2208 -0.8832 0.6779 -0.2047 -1.2551 -0.0373 -2.6265 0.9855 -0.996 -0.8358 1.1394 -2.6265 1.0883 -2.6265 -1.5103 -0.3042 -1.1113 0.8494 -2.6265 0.2314 0.6846 -1.4835 -0.4973 0.1673
PWM hg19	A C G T -0.214 -0.12 0.6464 -0.4698 0.1204 0.2597 -1.1155 0.1311 -1.3682 -0.2612 0.1784 0.5711 -0.4522 0.7575 -0.12 -0.4522 0.5956 -0.2412 -0.0367 -1.009 -0.3693 -0.1658 0.7398 -0.4522 -2.6265 -0.2724 -1.8452 0.9927 -1.1185 0.9839 0.3298 -1.6116 0.9886 -1.3836 -0.3792 -2.6265 -0.5926 0.1984 -0.7123 0.5032 -0.2699 -1.0897 0.9871 -0.6753 -0.0966 0.8706 -0.4987 -0.9629 -0.3605 -0.7299 0.8548 -0.3447 -1.3682 0.1331 -2.6265 0.8354 -1.1185 -0.681 1.3185 -2.6265 0.9377 -2.6265 -1.3836 -0.4426 -1.2298 1.0272 -2.6265 0.0863 0.536 -1.3553 -0.3344 0.0228