back NR5A2_f1 HOCOMOCO-build9-MAR2012


UniProt NR5A2
motif weight45.32609
total sequences51
data sources TRANSFAC20112:51
motif logo
consensusbYCAAGGbYv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    3.2337    12.2554     9.7554    20.0815 
    1.9565    17.7717     2.7174    22.8804 
       0.0    45.3261        0.0        0.0 
   45.3261        0.0        0.0        0.0 
   44.6739        0.0     0.6522        0.0 
    0.8696        0.0    44.4565        0.0 
       0.0        0.0    43.2609     2.0652 
    4.8913    18.0978     5.2174    17.1196 
     1.087    27.8261     2.1739    14.2391 
   23.4239     9.1304     7.4457     5.3261 
PPM
     A          C          G          T    
    0.0713     0.2704     0.2152      0.443 
    0.0432     0.3921       0.06     0.5048 
       0.0        1.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
    0.9856        0.0     0.0144        0.0 
    0.0192        0.0     0.9808        0.0 
       0.0        0.0     0.9544     0.0456 
    0.1079     0.3993     0.1151     0.3777 
     0.024     0.6139      0.048     0.3141 
    0.5168     0.2014     0.1643     0.1175 
PWM uniform
     A          C          G          T    
   -1.0764     0.0725    -0.1373     0.5378 
   -1.4402     0.4215     -1.208     0.6627 
    -2.556     1.3263     -2.556     -2.556 
    1.3263     -2.556     -2.556     -2.556 
    1.3121     -2.556    -2.0349     -2.556 
   -1.9079     -2.556     1.3074     -2.556 
    -2.556     -2.556     1.2807    -1.4036 
   -0.7428     0.4388    -0.6885      0.386 
   -1.7952     0.8513    -1.3682     0.2124 
    0.6853    -0.1974    -0.3803    -0.6711 
PWM hg19
     A          C          G          T    
   -1.1936     0.2434     0.0307     0.3907 
   -1.5415      0.596    -1.0693     0.5147 
    -2.556     1.5059     -2.556     -2.556 
    1.1751     -2.556     -2.556     -2.556 
     1.161     -2.556    -1.9564     -2.556 
   -1.9787     -2.556     1.4869     -2.556 
    -2.556     -2.556     1.4601    -1.5067 
   -0.8706     0.6134    -0.5317     0.2402 
   -1.8746     1.0288    -1.2375     0.0682 
    0.5371    -0.0303    -0.2164    -0.8007