| UniProt |
NR2E3
|
| motif weight | 22.61862 |
| total sequences | 29 |
| data sources |
TEXTMINE:25 TRANSFAC20112:4 |
| motif logo |
|
| consensus | nAAKTCAAAARKMM |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
11.3408 3.5 4.2778 3.5
18.7297 1.5556 1.5556 0.7778
17.7628 0.7778 3.3003 0.7778
1.5556 1.5556 16.3964 3.1111
1.5556 0.0 2.3333 18.7297
1.5556 20.2853 0.7778 0.0
21.0631 0.0 0.7778 0.7778
17.952 3.1111 1.5556 0.0
21.8408 0.0 0.0 0.7778
18.5405 0.0 3.3003 0.7778
5.6336 1.5556 13.8739 1.5556
0.7778 1.5556 4.6667 15.6186
3.1111 15.6186 2.3333 1.5556
16.5908 3.3056 1.75 0.9722
|
| PPM | A C G T
0.5014 0.1547 0.1891 0.1547
0.8281 0.0688 0.0688 0.0344
0.7853 0.0344 0.1459 0.0344
0.0688 0.0688 0.7249 0.1375
0.0688 0.0 0.1032 0.8281
0.0688 0.8968 0.0344 0.0
0.9312 0.0 0.0344 0.0344
0.7937 0.1375 0.0688 0.0
0.9656 0.0 0.0 0.0344
0.8197 0.0 0.1459 0.0344
0.2491 0.0688 0.6134 0.0688
0.0344 0.0688 0.2063 0.6905
0.1375 0.6905 0.1032 0.0688
0.7335 0.1461 0.0774 0.043
|
| PWM uniform | A C G T
0.6333 -0.4078 -0.2408 -0.4078
1.1092 -1.0135 -1.0135 -1.4186
1.0584 -1.4186 -0.4556 -1.4186
-1.0135 -1.0135 0.9819 -0.503
-1.0135 -2.1105 -0.7261 1.1092
-1.0135 1.186 -1.4186 -2.1105
1.2222 -2.1105 -1.4186 -1.4186
1.0686 -0.503 -1.0135 -2.1105
1.2572 -2.1105 -2.1105 -1.4186
1.0995 -2.1105 -0.4556 -1.4186
-0.0033 -1.0135 0.823 -1.0135
-1.4186 -1.0135 -0.1667 0.9355
-0.503 0.9355 -0.7261 -1.0135
0.9931 -0.4543 -0.9336 -1.3009
|
| PWM hg19 | A C G T
0.4893 -0.2557 -0.0839 -0.5324
0.9612 -0.888 -0.888 -1.4928
0.9108 -1.323 -0.305 -1.4928
-1.1139 -0.888 1.1573 -0.6247
-1.1139 -2.1105 -0.5858 0.9612
-1.1139 1.3628 -1.323 -2.1105
1.0735 -2.1105 -1.323 -1.4928
0.9208 -0.3541 -0.888 -2.1105
1.1083 -2.1105 -2.1105 -1.4928
0.9516 -2.1105 -0.305 -1.4928
-0.1378 -0.888 0.9971 -1.1139
-1.4928 -0.888 -0.0079 0.7888
-0.6247 1.1106 -0.5858 -1.1139
0.8459 -0.3037 -0.8034 -1.3838
|