back NR2E3_f1 HOCOMOCO-build9-MAR2012


UniProt NR2E3
motif weight22.61862
total sequences29
data sources TEXTMINE:25
TRANSFAC20112:4
motif logo
consensusnAAKTCAAAARKMM
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   11.3408        3.5     4.2778        3.5 
   18.7297     1.5556     1.5556     0.7778 
   17.7628     0.7778     3.3003     0.7778 
    1.5556     1.5556    16.3964     3.1111 
    1.5556        0.0     2.3333    18.7297 
    1.5556    20.2853     0.7778        0.0 
   21.0631        0.0     0.7778     0.7778 
    17.952     3.1111     1.5556        0.0 
   21.8408        0.0        0.0     0.7778 
   18.5405        0.0     3.3003     0.7778 
    5.6336     1.5556    13.8739     1.5556 
    0.7778     1.5556     4.6667    15.6186 
    3.1111    15.6186     2.3333     1.5556 
   16.5908     3.3056       1.75     0.9722 
PPM
     A          C          G          T    
    0.5014     0.1547     0.1891     0.1547 
    0.8281     0.0688     0.0688     0.0344 
    0.7853     0.0344     0.1459     0.0344 
    0.0688     0.0688     0.7249     0.1375 
    0.0688        0.0     0.1032     0.8281 
    0.0688     0.8968     0.0344        0.0 
    0.9312        0.0     0.0344     0.0344 
    0.7937     0.1375     0.0688        0.0 
    0.9656        0.0        0.0     0.0344 
    0.8197        0.0     0.1459     0.0344 
    0.2491     0.0688     0.6134     0.0688 
    0.0344     0.0688     0.2063     0.6905 
    0.1375     0.6905     0.1032     0.0688 
    0.7335     0.1461     0.0774      0.043 
PWM uniform
     A          C          G          T    
    0.6333    -0.4078    -0.2408    -0.4078 
    1.1092    -1.0135    -1.0135    -1.4186 
    1.0584    -1.4186    -0.4556    -1.4186 
   -1.0135    -1.0135     0.9819     -0.503 
   -1.0135    -2.1105    -0.7261     1.1092 
   -1.0135      1.186    -1.4186    -2.1105 
    1.2222    -2.1105    -1.4186    -1.4186 
    1.0686     -0.503    -1.0135    -2.1105 
    1.2572    -2.1105    -2.1105    -1.4186 
    1.0995    -2.1105    -0.4556    -1.4186 
   -0.0033    -1.0135      0.823    -1.0135 
   -1.4186    -1.0135    -0.1667     0.9355 
    -0.503     0.9355    -0.7261    -1.0135 
    0.9931    -0.4543    -0.9336    -1.3009 
PWM hg19
     A          C          G          T    
    0.4893    -0.2557    -0.0839    -0.5324 
    0.9612     -0.888     -0.888    -1.4928 
    0.9108     -1.323     -0.305    -1.4928 
   -1.1139     -0.888     1.1573    -0.6247 
   -1.1139    -2.1105    -0.5858     0.9612 
   -1.1139     1.3628     -1.323    -2.1105 
    1.0735    -2.1105     -1.323    -1.4928 
    0.9208    -0.3541     -0.888    -2.1105 
    1.1083    -2.1105    -2.1105    -1.4928 
    0.9516    -2.1105     -0.305    -1.4928 
   -0.1378     -0.888     0.9971    -1.1139 
   -1.4928     -0.888    -0.0079     0.7888 
   -0.6247     1.1106    -0.5858    -1.1139 
    0.8459    -0.3037    -0.8034    -1.3838