| UniProt |
NR1I3
|
| motif weight | 28.0 |
| total sequences | 38 |
| data sources |
TRANSFAC20112:38
|
| motif logo |
|
| consensus | RRGSTCAvvvRAGKWYRd |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
9.0494 0.0 13.8403 5.1103
12.7757 2.1293 13.0951 0.0
5.0038 0.0 20.9734 2.0228
0.0 3.9392 20.3346 3.7262
0.0 0.0 0.9582 27.0418
0.0 22.9962 1.9163 3.0875
25.9772 2.0228 0.0 0.0
8.943 4.5779 10.0076 4.4715
7.1331 5.4297 10.8593 4.5779
11.1787 5.5361 7.4525 3.8327
16.289 2.0228 8.73 0.9582
25.3384 0.0 2.6616 0.0
1.0646 0.0 26.9354 0.0
0.0 1.8099 5.962 20.2281
4.8973 2.981 0.0 20.1217
0.0 19.8023 2.0228 6.1749
19.9087 2.0228 3.9392 2.1293
5.1369 3.9658 10.0342 8.8631
|
| PPM | A C G T
0.3232 0.0 0.4943 0.1825
0.4563 0.076 0.4677 0.0
0.1787 0.0 0.749 0.0722
0.0 0.1407 0.7262 0.1331
0.0 0.0 0.0342 0.9658
0.0 0.8213 0.0684 0.1103
0.9278 0.0722 0.0 0.0
0.3194 0.1635 0.3574 0.1597
0.2548 0.1939 0.3878 0.1635
0.3992 0.1977 0.2662 0.1369
0.5817 0.0722 0.3118 0.0342
0.9049 0.0 0.0951 0.0
0.038 0.0 0.962 0.0
0.0 0.0646 0.2129 0.7224
0.1749 0.1065 0.0 0.7186
0.0 0.7072 0.0722 0.2205
0.711 0.0722 0.1407 0.076
0.1835 0.1416 0.3584 0.3165
|
| PWM uniform | A C G T
0.2324 -2.241 0.6277 -0.2761
0.5524 -0.9724 0.5756 -2.241
-0.2942 -2.241 1.0239 -1.009
-2.241 -0.4955 0.9941 -0.5412
-2.241 -2.241 -1.4755 1.2694
-2.241 1.1126 -1.047 -0.6921
1.2304 -1.009 -2.241 -2.241
0.2216 -0.3699 0.325 -0.3898
0.0168 -0.2237 0.4006 -0.3699
0.4275 -0.2069 0.0562 -0.5181
0.782 -1.009 0.1996 -1.4755
1.2063 -2.241 -0.8071 -2.241
-1.4177 -2.241 1.2655 -2.241
-2.241 -1.0865 -0.1422 0.9891
-0.3126 -0.7197 -2.241 0.984
-2.241 0.9687 -1.009 -0.1113
0.9738 -1.009 -0.4955 -0.9724
-0.2716 -0.49 0.3274 0.2134
|
| PWM hg19 | A C G T
0.0918 -2.241 0.8012 -0.4076
0.4079 -0.8375 0.7485 -2.241
-0.4252 -2.241 1.2005 -1.116
-2.241 -0.3421 1.1706 -0.6657
-2.241 -2.241 -1.3734 1.1197
-2.241 1.2897 -0.9159 -0.8119
1.081 -0.876 -2.241 -2.241
0.0811 -0.213 0.4951 -0.5185
-0.1205 -0.0632 0.5716 -0.4992
0.2844 -0.046 0.2222 -0.6433
0.6355 -0.876 0.3679 -1.5552
1.057 -2.241 -0.6648 -2.241
-1.5015 -2.241 1.4436 -2.241
-2.241 -0.9576 0.0202 0.841
-0.4432 -0.5738 -2.241 0.836
-2.241 1.1449 -0.876 -0.2463
0.8258 -0.876 -0.3421 -1.0811
-0.4032 -0.3364 0.4975 0.073
|
