back NR1I2_si HOCOMOCO-build9-MAR2012


UniProt NR1I2
motif weight45.23305
total sequences50
data sources TRANSFAC20112:50
motif logo
consensusdAGKTCAb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   21.3983     2.9661    14.9364     5.9322 
   34.2161        0.0    11.0169        0.0 
       0.0        0.0    45.2331        0.0 
    4.7669        0.0     8.7924    31.6737 
       0.0     0.9534        0.0    44.2797 
       0.0     42.161      3.072        0.0 
   44.2797        0.0     0.9534        0.0 
    4.5551    15.2542    11.2288    14.1949 
PPM
     A          C          G          T    
    0.4731     0.0656     0.3302     0.1311 
    0.7564        0.0     0.2436        0.0 
       0.0        0.0        1.0        0.0 
    0.1054        0.0     0.1944     0.7002 
       0.0     0.0211        0.0     0.9789 
       0.0     0.9321     0.0679        0.0 
    0.9789        0.0     0.0211        0.0 
    0.1007     0.3372     0.2482     0.3138 
PWM uniform
     A          C          G          T    
    0.6004    -1.1406     0.2592    -0.5771 
    1.0537    -2.5546     -0.024    -2.5546 
   -2.5546    -2.5546     1.3262    -2.5546 
   -0.7625    -2.5546    -0.2297     0.9787 
   -2.5546    -1.8613    -2.5546     1.3054 
   -2.5546     1.2574    -1.1139    -2.5546 
    1.3054    -2.5546    -1.8613    -2.5546 
   -0.8002      0.279    -0.0065     0.2114 
PWM hg19
     A          C          G          T    
    0.4529    -0.9991     0.4322    -0.7088 
    0.9036    -2.5546     0.1456    -2.5546 
   -2.5546    -2.5546     1.5058    -2.5546 
   -0.8897    -2.5546    -0.0631     0.8289 
   -2.5546    -1.7655    -2.5546     1.1542 
   -2.5546     1.4367    -0.9713    -2.5546 
    1.1542    -2.5546    -1.7655    -2.5546 
   -0.9264     0.4522     0.1634     0.0672