| UniProt |
NR1I2
|
| motif weight | 29.1831 |
| total sequences | 50 |
| data sources |
TRANSFAC20112:50
|
| motif logo |
|
| consensus | ddRRSTYARnnRAGKTCAb |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
9.3803 3.6479 5.6282 10.5268
8.7549 1.8761 11.6732 6.8789
12.6113 3.9606 11.569 1.0423
7.7127 0.0 19.3859 2.0845
1.9803 5.9408 16.3634 4.8986
0.0 0.938 1.8761 26.369
0.0 17.7183 1.8761 9.5887
20.6366 8.5465 0.0 0.0
17.5099 2.8141 4.7944 4.0648
8.7549 6.0451 8.5465 5.8366
9.693 6.8789 6.7746 5.8366
17.4056 1.9803 9.7972 0.0
27.0986 0.0 2.0845 0.0
0.0 0.0 29.1831 0.0
0.0 2.0845 8.8592 18.2394
2.8141 1.8761 1.0423 23.4507
0.0 22.2 3.9606 3.0225
26.2648 0.938 1.9803 0.0
3.8042 6.6183 10.3704 8.3901
|
| PPM | A C G T
0.3214 0.125 0.1929 0.3607
0.3 0.0643 0.4 0.2357
0.4321 0.1357 0.3964 0.0357
0.2643 0.0 0.6643 0.0714
0.0679 0.2036 0.5607 0.1679
0.0 0.0321 0.0643 0.9036
0.0 0.6071 0.0643 0.3286
0.7071 0.2929 0.0 0.0
0.6 0.0964 0.1643 0.1393
0.3 0.2071 0.2929 0.2
0.3321 0.2357 0.2321 0.2
0.5964 0.0679 0.3357 0.0
0.9286 0.0 0.0714 0.0
0.0 0.0 1.0 0.0
0.0 0.0714 0.3036 0.625
0.0964 0.0643 0.0357 0.8036
0.0 0.7607 0.1357 0.1036
0.9 0.0321 0.0679 0.0
0.1304 0.2268 0.3554 0.2875
|
| PWM uniform | A C G T
0.228 -0.5945 -0.2293 0.3343
0.1649 -1.0963 0.4304 -0.0526
0.5026 -0.5272 0.422 -1.4624
0.05 -2.267 0.9104 -1.0224
-1.0586 -0.1821 0.7486 -0.3489
-2.267 -1.5193 -1.0963 1.207
-2.267 0.8244 -1.0963 0.2482
0.9704 0.1429 -2.267 -2.267
0.8131 -0.7999 -0.3672 -0.5058
0.1649 -0.1668 0.1429 -0.1976
0.2581 -0.0526 -0.0662 -0.1976
0.8074 -1.0586 0.268 -2.267
1.2334 -2.267 -1.0224 -2.267
-2.267 -2.267 1.3054 -2.267
-2.267 -1.0224 0.1757 0.8521
-0.7999 -1.0963 -1.4624 1.0935
-2.267 1.0407 -0.5272 -0.7445
1.2031 -1.5193 -1.0586 -2.267
-0.5603 -0.0869 0.3205 0.1262
|
| PWM hg19 | A C G T
0.0871 -0.4434 -0.0683 0.192
0.0248 -0.9665 0.6021 -0.1891
0.3584 -0.374 0.5936 -1.5449
-0.0884 -2.267 1.0865 -1.13
-1.1646 -0.0201 0.9234 -0.4793
-2.267 -1.4187 -0.9665 1.0575
-2.267 0.9998 -0.9665 0.107
0.8223 0.3108 -2.267 -2.267
0.6661 -0.6562 -0.2095 -0.6321
0.0248 -0.0045 0.3108 -0.3313
0.1168 0.112 0.0982 -0.3313
0.6605 -0.9269 0.4377 -2.267
1.0838 -2.267 -0.8887 -2.267
-2.267 -2.267 1.4837 -2.267
-2.267 -0.8887 0.3441 0.7048
-0.9167 -0.9665 -1.3571 0.9447
-2.267 1.2176 -0.374 -0.8633
1.0537 -1.4187 -0.9269 -2.267
-0.6851 0.077 0.4908 -0.0133
|
