| UniProt |
NR1H4
|
| motif weight | 45.16807 |
| total sequences | 50 |
| data sources |
TRANSFAC20112:50
|
| motif logo |
|
| consensus | RRGGTCAnKRWCCY |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
22.5315 1.9433 16.9643 3.729
20.5882 0.9454 23.6345 0.0
0.0 0.9454 43.1723 1.0504
1.0504 0.0 39.3908 4.7269
0.8403 2.8361 1.0504 40.4412
0.9454 37.2899 5.8824 1.0504
44.1176 0.0 1.0504 0.0
17.8571 8.6134 8.9286 9.7689
1.9958 5.8824 7.1429 30.1471
9.979 1.0504 33.0882 1.0504
27.416 5.7773 3.7815 8.1933
2.7311 38.4454 0.9454 3.0462
1.0504 40.1261 0.9454 3.0462
3.8866 5.042 4.8319 31.4076
|
| PPM | A C G T
0.4988 0.043 0.3756 0.0826
0.4558 0.0209 0.5233 0.0
0.0 0.0209 0.9558 0.0233
0.0233 0.0 0.8721 0.1047
0.0186 0.0628 0.0233 0.8953
0.0209 0.8256 0.1302 0.0233
0.9767 0.0 0.0233 0.0
0.3953 0.1907 0.1977 0.2163
0.0442 0.1302 0.1581 0.6674
0.2209 0.0233 0.7326 0.0233
0.607 0.1279 0.0837 0.1814
0.0605 0.8512 0.0209 0.0674
0.0233 0.8884 0.0209 0.0674
0.086 0.1116 0.107 0.6953
|
| PWM uniform | A C G T
0.6512 -1.4418 0.3807 -0.9614
0.5649 -1.8643 0.6971 -2.5536
-2.5536 -1.8643 1.2819 -1.8104
-1.8104 -2.5536 1.1923 -0.7682
-1.9212 -1.1731 -1.8104 1.218
-1.8643 1.1389 -0.583 -1.8104
1.3031 -2.5536 -1.8104 -2.5536
0.4293 -0.2469 -0.2145 -0.1328
-1.4238 -0.583 -0.4138 0.9321
-0.1134 -1.8104 1.0225 -1.8104
0.8402 -0.5985 -0.9503 -0.2918
-1.2012 1.1686 -1.8643 -1.1191
-1.8104 1.2104 -1.8643 -1.1191
-0.9283 -0.7142 -0.7499 0.9718
|
| PWM hg19 | A C G T
0.5033 -1.3154 0.5548 -1.0826
0.4176 -1.7689 0.8737 -2.5536
-2.5536 -1.7689 1.4614 -1.8886
-1.8886 -2.5536 1.3714 -0.8952
-1.9908 -1.033 -1.7103 1.0672
-1.9383 1.3177 -0.4236 -1.8886
1.152 -2.5536 -1.7103 -2.5536
0.2831 -0.0806 -0.0477 -0.2727
-1.5259 -0.4236 -0.2506 0.7826
-0.2536 -1.7103 1.2008 -1.8886
0.6911 -0.4394 -0.8015 -0.4292
-1.3135 1.3476 -1.7689 -1.2347
-1.8886 1.3896 -1.7689 -1.2347
-1.0506 -0.5581 -0.5948 0.8221
|
