| UniProt |
NR1D1
|
| motif weight | 12.93711 |
| total sequences | 20 |
| data sources |
TRANSFAC20112:20
|
| motif logo |
|
| consensus | WWAAvTAGGTCAnd |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
7.5645 0.5079 2.3255 2.5393
6.8428 0.0 1.0692 5.0252
10.9057 0.9623 0.0 1.0692
10.9057 0.0 0.0 2.0314
4.0629 1.9245 5.8805 1.0692
0.0 1.0692 1.0692 10.7987
10.9057 0.0 2.0314 0.0
0.0 0.0 11.8679 1.0692
0.0 0.0 12.9371 0.0
0.0 0.0 0.0 12.9371
0.0 12.0818 0.0 0.8553
12.9371 0.0 0.0 0.0
4.9182 1.0692 4.9182 2.0314
5.5063 0.4811 2.5126 4.4371
|
| PPM | A C G T
0.5847 0.0393 0.1798 0.1963
0.5289 0.0 0.0826 0.3884
0.843 0.0744 0.0 0.0826
0.843 0.0 0.0 0.157
0.314 0.1488 0.4545 0.0826
0.0 0.0826 0.0826 0.8347
0.843 0.0 0.157 0.0
0.0 0.0 0.9174 0.0826
0.0 0.0 1.0 0.0
0.0 0.0 0.0 1.0
0.0 0.9339 0.0 0.0661
1.0 0.0 0.0 0.0
0.3802 0.0826 0.3802 0.157
0.4256 0.0372 0.1942 0.343
|
| PWM uniform | A C G T
0.7503 -1.2164 -0.2673 -0.1977
0.6582 -1.8006 -0.8183 0.38
1.0919 -0.8829 -1.8006 -0.8183
1.0919 -1.8006 -1.8006 -0.3717
0.1938 -0.4126 0.5206 -0.8183
-1.8006 -0.8183 -0.8183 1.0826
1.0919 -1.8006 -0.3717 -1.8006
-1.8006 -1.8006 1.172 -0.8183
-1.8006 -1.8006 1.254 -1.8006
-1.8006 -1.8006 -1.8006 1.254
-1.8006 1.189 -1.8006 -0.952
1.254 -1.8006 -1.8006 -1.8006
0.3609 -0.8183 0.3609 -0.3717
0.4615 -1.24 -0.2061 0.2704
|
| PWM hg19 | A C G T
0.6086 -1.1313 -0.1211 -0.3192
0.5178 -1.8006 -0.7 0.244
0.9465 -0.769 -1.8006 -0.9122
0.9465 -1.8006 -1.8006 -0.4871
0.0617 -0.2722 0.6871 -0.9122
-1.8006 -0.7 -0.7 0.9373
0.9465 -1.8006 -0.2296 -1.8006
-1.8006 -1.8006 1.3464 -0.9122
-1.8006 -1.8006 1.4291 -1.8006
-1.8006 -1.8006 -1.8006 1.1072
-1.8006 1.3635 -1.8006 -1.0375
1.1072 -1.8006 -1.8006 -1.8006
0.2253 -0.7 0.5245 -0.4871
0.3241 -1.1573 -0.0576 0.1366
|
