back NKX31_si HOCOMOCO-build9-MAR2012


UniProt NKX31
motif weight43.0
total sequences46
data sources JASPAR:20
TRANSFAC20112:26
motif logo
consensusWWTAAGTAWWhdh
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   23.5556     1.4786     2.3902    15.5756 
   21.9558     3.8688     1.8232    15.3522 
    1.8232     2.9572        0.0    38.2196 
    41.866      1.134        0.0        0.0 
   38.9087     2.2681        0.0     1.8232 
    4.0913        0.0     33.461     5.4478 
       0.0        0.0        0.0       43.0 
   36.4977     1.7219     4.7804        0.0 
    8.1825     7.0485     1.9443    25.8246 
   23.0898     1.7219     3.8688    14.3194 
    9.3166     8.4467     4.7804    20.4563 
   20.2339     2.0456     7.9601    12.7604 
   18.0264      5.975     3.9294    15.0692 
PPM
     A          C          G          T    
    0.5478     0.0344     0.0556     0.3622 
    0.5106       0.09     0.0424      0.357 
    0.0424     0.0688        0.0     0.8888 
    0.9736     0.0264        0.0        0.0 
    0.9049     0.0527        0.0     0.0424 
    0.0951        0.0     0.7782     0.1267 
       0.0        0.0        0.0        1.0 
    0.8488       0.04     0.1112        0.0 
    0.1903     0.1639     0.0452     0.6006 
     0.537       0.04       0.09      0.333 
    0.2167     0.1964     0.1112     0.4757 
    0.4706     0.0476     0.1851     0.2968 
    0.4192      0.139     0.0914     0.3504 
PWM uniform
     A          C          G          T    
    0.7397    -1.5754    -1.2556     0.3456 
    0.6722    -0.8882    -1.4423     0.3319 
   -1.4423    -1.0984    -2.5203     1.2089 
    1.2979    -1.7291    -2.5203    -2.5203 
    1.2263     -1.293    -2.5203    -1.4423 
    -0.843    -2.5203     1.0793    -0.6043 
   -2.5203    -2.5203    -2.5203     1.3241 
    1.1639    -1.4796    -0.7147    -2.5203 
    -0.248    -0.3807    -1.3994     0.8283 
    0.7205    -1.4796    -0.8882     0.2665 
   -0.1308    -0.2194    -0.7147     0.6045 
     0.594    -1.3648    -0.2727     0.1587 
    0.4839     -0.525    -0.8757     0.3144 
PWM hg19
     A          C          G          T    
    0.5915    -1.4596     -1.121     0.2004 
    0.5244    -0.7385    -1.3178     0.1869 
   -1.5416    -0.9566    -2.5203     1.0582 
    1.1469    -1.6249    -2.5203    -2.5203 
    1.0756    -1.1602    -2.5203    -1.5416 
   -0.9669    -2.5203     1.2578    -0.7347 
   -2.5203    -2.5203    -2.5203      1.173 
    1.0135    -1.3575    -0.5595    -2.5203 
   -0.3855    -0.2176    -1.2724     0.6795 
    0.5724    -1.3575    -0.7385     0.1221 
   -0.2703    -0.0533    -0.5595     0.4571 
    0.4468    -1.2359    -0.1075     0.0154 
    0.3375     -0.365    -0.7255     0.1695