| UniProt |
NKX28
|
| motif weight | 6.0 |
| total sequences | 6 |
| data sources |
TRANSFAC20112:6
|
| motif logo |
|
| consensus | bTCAAGGAb |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
0.1471 1.2059 1.2059 3.4412
0.0 0.0 0.0 6.0
0.0 4.6471 1.3529 0.0
5.7059 0.0 0.2941 0.0
6.0 0.0 0.0 0.0
0.0 0.0 6.0 0.0
0.0 0.0 3.5882 2.4118
3.5882 0.0 2.4118 0.0
0.1471 3.4412 1.2059 1.2059
|
| PPM | A C G T
0.0245 0.201 0.201 0.5735
0.0 0.0 0.0 1.0
0.0 0.7745 0.2255 0.0
0.951 0.0 0.049 0.0
1.0 0.0 0.0 0.0
0.0 0.0 1.0 0.0
0.0 0.0 0.598 0.402
0.598 0.0 0.402 0.0
0.0245 0.5735 0.201 0.201
|
| PWM uniform | A C G T
-1.186 -0.1637 -0.1637 0.6914
-1.4699 -1.4699 -1.4699 1.197
-1.4699 0.9615 -0.0785 -1.4699
1.1503 -1.4699 -0.9651 -1.4699
1.197 -1.4699 -1.4699 -1.4699
-1.4699 -1.4699 1.197 -1.4699
-1.4699 -1.4699 0.7285 0.3839
0.7285 -1.4699 0.3839 -1.4699
-1.186 0.6914 -0.1637 -0.1637
|
| PWM hg19 | A C G T
-1.222 -0.027 -0.027 0.5558
-1.4699 -1.4699 -1.4699 1.0539
-1.4699 1.1297 0.062 -1.4699
1.0077 -1.4699 -0.8885 -1.4699
1.0539 -1.4699 -1.4699 -1.4699
-1.4699 -1.4699 1.3683 -1.4699
-1.4699 -1.4699 0.8928 0.2551
0.5923 -1.4699 0.5404 -1.4699
-1.222 0.855 -0.027 -0.274
|
