back NFIL3_si HOCOMOCO-build9-MAR2012


UniProt NFIL3
motif weight51.0
total sequences54
data sources JASPAR:23
TRANSFAC20112:31
motif logo
consensusvTTAYGTAAbbbvb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   14.0699     9.9066    24.0802     2.9433 
    2.9433        0.0     0.9333    47.1233 
    0.9333        0.0     4.9533    45.1134 
    49.963        0.0        0.0      1.037 
       0.0    21.1369     1.8667    27.9965 
    7.8966        0.0    43.1034        0.0 
       0.0     1.9704        0.0    49.0296 
      51.0        0.0        0.0        0.0 
   50.0667        0.0        0.0     0.9333 
    0.9333    16.0799      10.84    23.1468 
    6.9633     8.0399    20.8899    15.1069 
    7.8966    18.0898     8.9733    16.0403 
   21.0332    18.9836     6.9633       4.02 
    7.8966    10.0499    12.9932    20.0602 
PPM
     A          C          G          T    
    0.2759     0.1942     0.4722     0.0577 
    0.0577        0.0     0.0183      0.924 
    0.0183        0.0     0.0971     0.8846 
    0.9797        0.0        0.0     0.0203 
       0.0     0.4144     0.0366      0.549 
    0.1548        0.0     0.8452        0.0 
       0.0     0.0386        0.0     0.9614 
       1.0        0.0        0.0        0.0 
    0.9817        0.0        0.0     0.0183 
    0.0183     0.3153     0.2125     0.4539 
    0.1365     0.1576     0.4096     0.2962 
    0.1548     0.3547     0.1759     0.3145 
    0.4124     0.3722     0.1365     0.0788 
    0.1548     0.1971     0.2548     0.3933 
PWM uniform
     A          C          G          T    
    0.0918     -0.232     0.6016    -1.2521 
   -1.2521     -2.637    -1.9694     1.2536 
   -1.9694     -2.637    -0.8387     1.2109 
     1.311     -2.637     -2.637    -1.9167 
    -2.637     0.4767    -1.5726     0.7468 
    -0.436     -2.637     1.1664     -2.637 
    -2.637    -1.5369     -2.637     1.2925 
    1.3311     -2.637     -2.637     -2.637 
     1.313     -2.637     -2.637    -1.9694 
   -1.9694     0.2171    -0.1498     0.5636 
   -0.5471      -0.42     0.4654     0.1584 
    -0.436     0.3285    -0.3216     0.2148 
     0.472     0.3743    -0.5471    -1.0098 
    -0.436    -0.2189     0.0176     0.4268 
PWM hg19
     A          C          G          T    
    -0.052    -0.0642     0.7781    -1.3657 
   -1.3657     -2.637    -1.8761     1.1024 
   -2.0418     -2.637    -0.6838     1.0598 
    1.1595     -2.637     -2.637    -1.9931 
    -2.637     0.6523     -1.449     0.5978 
   -0.5724     -2.637     1.3457     -2.637 
    -2.637    -1.4111     -2.637     1.1411 
    1.1796     -2.637     -2.637     -2.637 
    1.1616     -2.637     -2.637    -2.0418 
   -2.0418     0.3905     0.0193     0.4158 
   -0.6813    -0.2554     0.6409     0.0139 
   -0.5724     0.5028    -0.1552     0.0697 
    0.3248      0.549     -0.385    -1.1321 
   -0.5724    -0.0509     0.1888     0.2799