back NANOG_f1 HOCOMOCO-build9-MAR2012


UniProt NANOG
motif weight5.0
total sequences5
data sources TRANSFAC20112:5
motif logo
consensusTTTAATGb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
       0.0        0.0     1.9565     3.0435 
       0.0        0.0        0.0        5.0 
       0.0        0.0      1.087      3.913 
       5.0        0.0        0.0        0.0 
       5.0        0.0        0.0        0.0 
       0.0        0.0        0.0        5.0 
       0.0        0.0        5.0        0.0 
       0.0     0.9783     3.0435     0.9783 
PPM
     A          C          G          T    
       0.0        0.0     0.3913     0.6087 
       0.0        0.0        0.0        1.0 
       0.0        0.0     0.2174     0.7826 
       1.0        0.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
       0.0        0.0        0.0        1.0 
       0.0        0.0        1.0        0.0 
       0.0     0.1957     0.6087     0.1957 
PWM uniform
     A          C          G          T    
   -1.4126    -1.4126      0.356      0.735 
   -1.4126    -1.4126    -1.4126     1.1846 
   -1.4126    -1.4126    -0.1039       0.96 
    1.1846    -1.4126    -1.4126    -1.4126 
    1.1846    -1.4126    -1.4126    -1.4126 
   -1.4126    -1.4126    -1.4126     1.1846 
   -1.4126    -1.4126     1.1846    -1.4126 
   -1.4126    -0.1797      0.735    -0.1797 
PWM hg19
     A          C          G          T    
   -1.4126    -1.4126     0.5101     0.5996 
   -1.4126    -1.4126    -1.4126     1.0424 
   -1.4126    -1.4126     0.0329     0.8208 
    1.0424    -1.4126    -1.4126    -1.4126 
    1.0424    -1.4126    -1.4126    -1.4126 
   -1.4126    -1.4126    -1.4126     1.0424 
   -1.4126    -1.4126     1.3551    -1.4126 
   -1.4126    -0.0466     0.8983    -0.2867