back MBD2_si HOCOMOCO-build9-MAR2012


UniProt MBD2
motif weight110.53875
total sequences159
data sources METHBP:80
TRANSFAC20112:79
motif logo
consensusnSGGCCGGMKv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   16.7782    44.4129    44.4129     4.9348 
    5.9217    43.4259    51.3216     9.8695 
       0.0    27.6347    82.9041        0.0 
       0.0        0.0    57.2433    53.2955 
       0.0   110.5388        0.0        0.0 
       0.0   110.5388        0.0        0.0 
       0.0        0.0   110.5388        0.0 
       0.0        0.0   110.5388        0.0 
   59.2172    39.4781    11.8434        0.0 
   11.8434    11.8434    65.1389     21.713 
   35.5303    13.8173    53.2955     7.8956 
PPM
     A          C          G          T    
    0.1518     0.4018     0.4018     0.0446 
    0.0536     0.3929     0.4643     0.0893 
       0.0       0.25       0.75        0.0 
       0.0        0.0     0.5179     0.4821 
       0.0        1.0        0.0        0.0 
       0.0        1.0        0.0        0.0 
       0.0        0.0        1.0        0.0 
       0.0        0.0        1.0        0.0 
    0.5357     0.3571     0.1071        0.0 
    0.1071     0.1071     0.5893     0.1964 
    0.3214      0.125     0.4821     0.0714 
PWM uniform
     A          C          G          T    
   -0.4729     0.4589     0.4589    -1.5507 
   -1.4009      0.437        0.6    -0.9587 
   -3.1983        0.0      1.071    -3.1983 
   -3.1983    -3.1983     0.7069     0.6369 
   -3.1983     1.3552    -3.1983    -3.1983 
   -3.1983     1.3552    -3.1983    -3.1983 
   -3.1983    -3.1983     1.3552    -3.1983 
   -3.1983    -3.1983     1.3552    -3.1983 
    0.7401     0.3444    -0.7943    -3.1983 
   -0.7943    -0.7943     0.8337    -0.2301 
    0.2422    -0.6531     0.6369    -1.1556 
PWM hg19
     A          C          G          T    
   -0.6167     0.6376     0.6376    -1.6736 
   -1.5283     0.6156     0.7793    -1.0957 
   -3.1983     0.1762     1.2517    -3.1983 
   -3.1983    -3.1983     0.8866     0.4859 
   -3.1983     1.5365    -3.1983    -3.1983 
   -3.1983     1.5365    -3.1983    -3.1983 
   -3.1983    -3.1983     1.5365    -3.1983 
   -3.1983    -3.1983     1.5365    -3.1983 
    0.5887     0.5225    -0.6265    -3.1983 
   -0.9339    -0.6265     1.0137    -0.3762 
    0.0929    -0.4833     0.8163    -1.2888