back MAFA_f1 HOCOMOCO-build9-MAR2012


UniProt MAFA
motif weight27.0
total sequences37
data sources TRANSFAC20112:37
motif logo
consensusbKGCTGWMShhSYWvYYWYYv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    2.7122     9.6603      9.965     4.6625 
    2.8036        0.0     7.5576    16.6388 
    0.8533     0.8533    20.9661     4.3273 
       0.0    26.5734     0.4266        0.0 
    2.4989        0.0        0.0    24.5011 
       0.0     2.6817    24.3183        0.0 
   19.3205     2.8036     0.4266     4.4492 
    4.0226    16.0293     3.7178     3.2302 
       0.0    10.3002     9.8126     6.8871 
    8.7765    12.3725     0.9752     4.8758 
    4.5102    10.1783     3.1693     9.1422 
    0.9752     4.1445    18.1016     3.7788 
    2.1941    16.6388     1.8284     6.3386 
   17.9187     2.2551     2.1941     4.6321 
    6.6433     3.9007    13.7133     2.7427 
    2.2551    14.5666     1.8284     8.3499 
    6.8262    10.7269        0.0      9.447 
    4.0226     3.5959     2.8036    16.5779 
    2.2551     9.2641     2.1941    13.2867 
    3.0474     17.553      2.377     4.0226 
    6.7652     8.5937     8.7156     2.9255 
PPM
     A          C          G          T    
    0.1005     0.3578     0.3691     0.1727 
    0.1038        0.0     0.2799     0.6163 
    0.0316     0.0316     0.7765     0.1603 
       0.0     0.9842     0.0158        0.0 
    0.0926        0.0        0.0     0.9074 
       0.0     0.0993     0.9007        0.0 
    0.7156     0.1038     0.0158     0.1648 
     0.149     0.5937     0.1377     0.1196 
       0.0     0.3815     0.3634     0.2551 
    0.3251     0.4582     0.0361     0.1806 
     0.167      0.377     0.1174     0.3386 
    0.0361     0.1535     0.6704       0.14 
    0.0813     0.6163     0.0677     0.2348 
    0.6637     0.0835     0.0813     0.1716 
     0.246     0.1445     0.5079     0.1016 
    0.0835     0.5395     0.0677     0.3093 
    0.2528     0.3973        0.0     0.3499 
     0.149     0.1332     0.1038      0.614 
    0.0835     0.3431     0.0813     0.4921 
    0.1129     0.6501      0.088      0.149 
    0.2506     0.3183     0.3228     0.1084 
PWM uniform
     A          C          G          T    
   -0.7617     0.3252     0.3538    -0.3224 
   -0.7362    -2.2184     0.1013     0.8354 
   -1.5076    -1.5076     1.0567    -0.3855 
   -2.2184     1.2857    -1.8011    -2.2184 
   -0.8239    -2.2184    -2.2184     1.2071 
   -2.2184    -0.7703     1.1998    -2.2184 
    0.9782    -0.7362    -1.8011    -0.3621 
   -0.4465     0.7998    -0.5114     -0.625 
   -2.2184     0.3844     0.3396     0.0179 
    0.2371     0.5552    -1.4374    -0.2843 
   -0.3506     0.3734    -0.6401     0.2745 
   -1.4374    -0.4216     0.9158    -0.4981 
   -0.9201     0.8354    -1.0493    -0.0558 
    0.9061    -0.9001    -0.9201     -0.328 
   -0.0142    -0.4719      0.652    -0.7531 
   -0.9001      0.709    -1.0493     0.1916 
      0.01      0.422    -2.2184     0.3046 
   -0.4465    -0.5386    -0.7362     0.8319 
   -0.9001     0.2866    -0.9201     0.6222 
   -0.6711     0.8864    -0.8613    -0.4465 
     0.002     0.2179     0.2307    -0.7031 
PWM hg19
     A          C          G          T    
   -0.8781      0.495      0.524    -0.4523 
   -0.8535    -2.2184     0.2678     0.6886 
   -1.5833    -1.4103     1.2334    -0.5137 
   -2.2184     1.4637    -1.7348    -2.2184 
   -0.9379    -2.2184    -2.2184     1.0578 
   -2.2184    -0.6274     1.3774    -2.2184 
    0.8304    -0.5918    -1.7348    -0.4909 
   -0.5731     0.9747    -0.3592    -0.7462 
   -2.2184      0.555     0.5096     -0.119 
    0.0967     0.7278    -1.3341    -0.4151 
   -0.4797     0.5438    -0.4922     0.1336 
   -1.5183    -0.2667     1.0915    -0.6232 
   -1.0301     1.0105    -0.9196    -0.1915 
    0.7588    -0.7629    -0.7838    -0.4577 
   -0.1506    -0.3185     0.8255    -0.8698 
    -1.011     0.8831    -0.9196     0.0519 
   -0.1268     0.5931    -2.2184     0.1633 
   -0.5731    -0.3872    -0.5918     0.6851 
    -1.011     0.4559    -0.7838     0.4773 
   -0.7908     1.0619    -0.7222    -0.5731 
   -0.1347     0.3862     0.3992    -0.8217