| UniProt |
IRF1
|
| motif weight | 130.18483 |
| total sequences | 137 |
| data sources |
TRANSFAC20112:137
|
| motif logo |
|
| consensus | RAAAvYGAAAbh |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
40.7062 6.6906 79.8492 2.9389
107.4244 3.0014 18.1333 1.6257
128.5591 0.0 1.0005 0.6253
130.1848 0.0 0.0 0.0
21.76 37.1421 61.6533 9.6294
20.8846 32.9526 4.6271 71.7205
3.8768 1.8759 124.4322 0.0
127.9338 0.0 2.251 0.0
128.6841 1.5007 0.0 0.0
130.1848 0.0 0.0 0.0
11.0051 46.3963 54.4 18.3834
14.9756 38.1113 10.5986 66.4993
|
| PPM | A C G T
0.3127 0.0514 0.6134 0.0226
0.8252 0.0231 0.1393 0.0125
0.9875 0.0 0.0077 0.0048
1.0 0.0 0.0 0.0
0.1671 0.2853 0.4736 0.074
0.1604 0.2531 0.0355 0.5509
0.0298 0.0144 0.9558 0.0
0.9827 0.0 0.0173 0.0
0.9885 0.0115 0.0 0.0
1.0 0.0 0.0 0.0
0.0845 0.3564 0.4179 0.1412
0.115 0.2927 0.0814 0.5108
|
| PWM uniform | A C G T
0.2165 -1.4515 0.8759 -2.0948
1.1687 -2.0799 -0.5567 -2.4745
1.3464 -3.3228 -2.7229 -2.9082
1.3589 -3.3228 -3.3228 -3.3228
-0.3849 0.1276 0.6217 -1.1355
-0.4237 0.012 -1.7539 0.7702
-1.8913 -2.3902 1.3141 -3.3228
1.3416 -3.3228 -2.2757 -3.3228
1.3474 -2.5195 -3.3228 -3.3228
1.3589 -3.3228 -3.3228 -3.3228
-1.0161 0.3437 0.4991 -0.5438
-0.7348 0.1526 -1.0499 0.696
|
| PWM hg19 | A C G T
0.0667 -1.2946 1.0564 -2.2016
1.0159 -1.9463 -0.3842 -2.56
1.1933 -3.3228 -2.6362 -2.9581
1.2058 -3.3228 -3.3228 -3.3228
-0.5307 0.3053 0.8015 -1.2716
-0.5692 0.189 -1.6063 0.6184
-2.0068 -2.2753 1.4955 -3.3228
1.1885 -3.3228 -2.1532 -3.3228
1.1943 -2.4143 -3.3228 -3.3228
1.2058 -3.3228 -3.3228 -3.3228
-1.1543 0.5225 0.6785 -0.6881
-0.877 0.3304 -0.8843 0.5443
|
