| UniProt |
HXB7
|
| motif weight | 27.98837 |
| total sequences | 29 |
| data sources |
TRANSFAC20112:29
|
| motif logo |
|
| consensus | WTGATTRATK |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
8.1211 0.2529 1.1521 18.4622
0.0 0.0 0.0 27.9884
2.0233 0.0 25.9651 0.0
27.9884 0.0 0.0 0.0
0.0 0.0 0.0 27.9884
0.0 0.0 0.0 27.9884
13.1512 0.0 9.1047 5.7326
27.0891 0.8992 0.0 0.0
0.0 1.9109 0.0 26.0775
2.5291 1.5174 15.1744 8.7674
|
| PPM | A C G T
0.2902 0.009 0.0412 0.6596
0.0 0.0 0.0 1.0
0.0723 0.0 0.9277 0.0
1.0 0.0 0.0 0.0
0.0 0.0 0.0 1.0
0.0 0.0 0.0 1.0
0.4699 0.0 0.3253 0.2048
0.9679 0.0321 0.0 0.0
0.0 0.0683 0.0 0.9317
0.0904 0.0542 0.5422 0.3133
|
| PWM uniform | A C G T
0.1341 -1.9756 -1.3723 0.9019
-2.2408 -2.2408 -2.2408 1.3031
-1.0085 -2.2408 1.2304 -2.2408
1.3031 -2.2408 -2.2408 -2.2408
-2.2408 -2.2408 -2.2408 1.3031
-2.2408 -2.2408 -2.2408 1.3031
0.58 -2.2408 0.2384 -0.1761
1.2715 -1.5086 -2.2408 -2.2408
-2.2408 -1.0486 -2.2408 1.2345
-0.8454 -1.2034 0.7151 0.2038
|
| PWM hg19 | A C G T
-0.0051 -1.9299 -1.262 0.7544
-2.2408 -2.2408 -2.2408 1.1533
-1.1155 -2.2408 1.4082 -2.2408
1.1533 -2.2408 -2.2408 -2.2408
-2.2408 -2.2408 -2.2408 1.1533
-2.2408 -2.2408 -2.2408 1.1533
0.4352 -2.2408 0.4073 -0.3098
1.1218 -1.4094 -2.2408 -2.2408
-2.2408 -0.9177 -2.2408 1.0851
-0.9595 -1.0815 0.8894 0.0636
|
