| UniProt |
HXB6
|
| motif weight | 7.0 |
| total sequences | 7 |
| data sources |
TEXTMINE:1 TRANSFAC20112:6 |
| motif logo |
|
| consensus | dWTGATTKATGCn |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
3.3166 0.6335 1.5719 1.4781
3.4723 0.8446 0.0 2.6831
0.0 0.8446 0.0 6.1554
0.8446 0.0 6.1554 0.0
7.0 0.0 0.0 0.0
0.0 0.0 0.0 7.0
0.0 0.0 0.0 7.0
0.8446 0.0 3.5277 2.6276
6.1554 0.0 0.8446 0.0
0.0 0.0 0.0 7.0
0.0 0.0 6.1554 0.8446
3.4723 3.5277 0.0 0.0
3.5277 1.783 0.8446 0.8446
|
| PPM | A C G T
0.4738 0.0905 0.2246 0.2112
0.496 0.1207 0.0 0.3833
0.0 0.1207 0.0 0.8793
0.1207 0.0 0.8793 0.0
1.0 0.0 0.0 0.0
0.0 0.0 0.0 1.0
0.0 0.0 0.0 1.0
0.1207 0.0 0.504 0.3754
0.8793 0.0 0.1207 0.0
0.0 0.0 0.0 1.0
0.0 0.0 0.8793 0.1207
0.496 0.504 0.0 0.0
0.504 0.2547 0.1207 0.1207
|
| PWM uniform | A C G T
0.5309 -0.6916 -0.083 -0.1296
0.571 -0.5189 -1.5255 0.3487
-1.5255 -0.5189 -1.5255 1.0885
-0.5189 -1.5255 1.0885 -1.5255
1.2082 -1.5255 -1.5255 -1.5255
-1.5255 -1.5255 -1.5255 1.2082
-1.5255 -1.5255 -1.5255 1.2082
-0.5189 -1.5255 0.5849 0.331
1.0885 -1.5255 -0.5189 -1.5255
-1.5255 -1.5255 -1.5255 1.2082
-1.5255 -1.5255 1.0885 -0.5189
0.571 0.5849 -1.5255 -1.5255
0.5849 0.0147 -0.5189 -0.5189
|
| PWM hg19 | A C G T
0.3974 -0.584 0.0597 -0.2437
0.4367 -0.399 -1.5255 0.2194
-1.5255 -0.399 -1.5255 0.946
-0.6142 -1.5255 1.2592 -1.5255
1.0643 -1.5255 -1.5255 -1.5255
-1.5255 -1.5255 -1.5255 1.0643
-1.5255 -1.5255 -1.5255 1.0643
-0.6142 -1.5255 0.7475 0.2022
0.946 -1.5255 -0.399 -1.5255
-1.5255 -1.5255 -1.5255 1.0643
-1.5255 -1.5255 1.2592 -0.6142
0.4367 0.7475 -1.5255 -1.5255
0.4503 0.1612 -0.399 -0.6142
|